Query= MSMg01no266_f18.b1 MSMg01no266_f18.b1 CHROMAT_FILE:
MSMg01no266_f18.b1 PHD_FILE: MSMg01no266_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:07 2005
(705 letters)
>mm_chr2_54487916_54489020
Length = 1105
Score = 1274 bits (659), Expect = 0.0
Identities = 691/703 (98%), Gaps = 2/703 (0%)
Strand = Plus / Plus
Query: 5 gaattctatgcttatctctttaccacacttttgactgggttgttagagtctacctttttg 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctatgcttagctctttaccacacttttgactgggttgttagagtctacctttttg 262
Query: 65 agttctttatataaactttgatgggtgcaaggttataacaaggttctcttttagcaatag 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agttctttatataaattttgatgggtgcaaggttataacaaggttctcttttagcaatag 322
Query: 125 ggaactagcaatagagacaacagctaaaaggctacatgtattaagattcagaaacatttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggaactagcaatagagacaacagctaaaaggctacatgtattaagattcagaaacatttt 382
Query: 185 gtacttaaattataaaattttaaaaca--gtttaaaatccatttttcatcagggttatta 242
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 383 gtacttaaattataaaattttaaaacacagtttaaaatccatttttcatcagggttatta 442
Query: 243 aattttcaggtaaatgcttttataggattgtcacccaatcaaagcaaagataatgatgta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aattttcaggtaaatgcttttataggattgtcacccaatcaaagcaaagataatgatgta 502
Query: 303 agcactaataattactcagttagtttacaaagcaatacagctatctttgggtcaagattt 362
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 503 agcactaatgattactcagttagtttacaaagtaatacagctatctttgggtcaagattt 562
Query: 363 gactatacttaccgcaaagaacaatagaaatctaaatgtctctgttaatcaaacaagtac 422
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gactatacttagggcaaagaacaatagaaatctaaatgtctctgttaatcaaacaagtac 622
Query: 423 catggtttatctttgtaattataactctgtgataggcattataacatgtcaatattattg 482
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 623 catggtttatctttgcaattataactctgtgataggcattttaacatgtcaatattattg 682
Query: 483 atctccataaagataaaggcatacctaagaacataaactacagttatttcatcctattat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atctccataaagataaaggcatacctaagaacataaactacagttatttcatcctattat 742
Query: 543 ttgaggtacacatttttatgttgtctggtgtggaagaacaaaatgtcatgtttttgaaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttgaggtacacatttttatgttgtctggtgtggaagaacaaaatgtcatgtttttgaaaa 802
Query: 603 atgataagtatactagaaaatagtanatacattatttagtttgacattttctaaatatgc 662
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 803 atgataagtatactagaaaatagtaaatacattatttagtttgacattttctaaatatgc 862
Query: 663 tcttattttatctaanagtccatattgtgttttatctgattga 705
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 863 tcttattttatctaaaagtccatattgtgttttatctgattga 905
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 705
Length of database: 1105
Length adjustment: 10
Effective length of query: 695
Effective length of database: 1095
Effective search space: 761025
Effective search space used: 761025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no266_f18.g1 MSMg01no266_f18.g1 CHROMAT_FILE:
MSMg01no266_f18.g1 PHD_FILE: MSMg01no266_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:08 2005
(299 letters)
>mm_chr2_54667681_54668379
Length = 699
Score = 563 bits (291), Expect = e-165
Identities = 297/299 (99%)
Strand = Plus / Minus
Query: 1 cattgcttgaatttgaggctcatattttatcttttatctgtcatattatttgttaatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cattgcttgaatttgaggctcatattttatcttttatctgtcatattatttgttaatggc 440
Query: 61 aataataaaacataaggcaaatggtactatcttcagttaatcaccaactttataaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aataataaaacataaggcaaatggtactatcttcagttaatcaccaactttataaaatat 380
Query: 121 gactccttttataagacagaagcaactggaatagcttagtaaaaacaaaaattatagaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gactccttttataagacagaagcaactggaatagcttagtaaaaacaaaaattatagaaa 320
Query: 181 cagatgaaggacacttgatctaaaagctataaaagccattataaaaaatctaaagcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagatgaaggacacttgatctaaaagctataaaagccattataaaaaatctaaagcaaaa 260
Query: 241 ataaaattgactaattttcctacattcttttgaataaatatctgcaggtacatgaatga 299
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 259 ataaaattgactaattttcctacattcttttgaataaatatctgcagggacatgaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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