Query= MSMg01no267_c04.b1 MSMg01no267_c04.b1 CHROMAT_FILE:
MSMg01no267_c04.b1 PHD_FILE: MSMg01no267_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:06 2005
(319 letters)
>mm_chr2_75729228_75729946
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 5 gaattctggatgagttaagaattaattaagaaacaactttaaactttacgtggattccat 64
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 206 gaattctggatgagttaagaattaattaagaaataactttaaactt-acgtggattccat 264
Query: 65 atttggttttagttctgtgtgatttctgtataattaaaaaataataatagcaataccagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttggttttagttctgtgtgatttctgtataattaaaaaataataatagcaataccagc 324
Query: 125 cactactgggttttcttaaaataaaaattaatgaggtgattttactgggtgtaaacagta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cactactgggttttcttaaaataaaaattaatgaggtgattttactgggtgtaaacagta 384
Query: 185 ccattgaaagataactgaaattatgcatagtattagttacatgtggtaatttgactggaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccattgaaagataactgaaattatgcatagtattagttacatgtggtaatttgactggaa 444
Query: 245 aacaagcaaacactgtcatgtttgaaagaatgtagaggtaaagatcttaataaacaccca 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 445 aacaagcaaacactgtcatgtttgaaagaatgtagaggtaaagatcttaataaacatcca 504
Query: 305 tgtaacttacaactg 319
|||||||||||||||
Sbjct: 505 tgtaacttacaactg 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_c04.g1 MSMg01no267_c04.g1 CHROMAT_FILE:
MSMg01no267_c04.g1 PHD_FILE: MSMg01no267_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:07 2005
(348 letters)
>mm_chr2_75890007_75890754
Length = 748
Score = 650 bits (336), Expect = 0.0
Identities = 345/348 (99%)
Strand = Plus / Minus
Query: 1 accacggggacaaggggaggaaatgcagagcaaagcgggactcagatgcctggtatatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 accacggggacaaggggaggaaatgcagagcaaagcgggactcagatgcctggtatatgg 489
Query: 61 tatcctagcaccccttcatccatcctgaacaaagaaaacacaagtgccttgtgaacatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tatcctagcaccccttcatccatcctgaacaaagaaaacacaagtgccttgtgaacatct 429
Query: 121 cgctagcttaatatttctggggtctgctaaaccaacaggagtaaaaaggcataagatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 428 cgctagcttaatatttctggggtctgctaaaccaacaggagtaaaaaggcagaagatgtt 369
Query: 181 cctcctcttcccagtgactcacacccatgagcaaaggacaccagaacaagcaagttaaca 240
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 368 cctcctcttcccagtgactcacacccatgagcaaaggacaccagaacgagccagttaaca 309
Query: 241 gaaatgaatgaggggactggggttggagcctgtggttaacagctacgccagtagaattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gaaatgaatgaggggactggggttggagcctgtggttaacagctacgccagtagaattct 249
Query: 301 gaattgtgttttgaaagctcctttcctgggtggccaacagcttcataa 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gaattgtgttttgaaagctcctttcctgggtggccaacagcttcataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
