Query= MSMg01no267_e08.b1 MSMg01no267_e08.b1 CHROMAT_FILE:
MSMg01no267_e08.b1 PHD_FILE: MSMg01no267_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:17 2005
(310 letters)
>mm_chr2_64910672_64911380
Length = 709
Score = 567 bits (293), Expect = e-166
Identities = 302/305 (99%), Gaps = 1/305 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaactgaaagggaaaggaaacaaaggactggatgcgtccacttgtgtttctgaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaactgaaagggaaaggaaacaaaggactggatgcgtccacttgtgtttctgaa 263
Query: 64 gccacaccatcttgagagacagcagtgcacgctcaaccttgccatatgccaagtacactc 123
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gccacaccatct-gagagacagcagtgcacgctcaaccttgccatatgccaagtacactc 322
Query: 124 ttacagcacagtgtttccaagaataacataaaccatttttccaagtgtactgcctgctgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttacagcacagtgtttccaagaataacataaaccatttttccaagtgtactgcctgctgc 382
Query: 184 ccaacagctcctacctacttacaaagttcagaagaaatgaaccaaaccagagaccttgtg 243
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 383 ccaacagctcctacctacttacaaagtttagaagaaatgaaccaaaccagagaccttgtg 442
Query: 244 agcaggtgggcataaatgaccaactggattcatgggtaaatattttacataagttgatag 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 443 agcaggtgggcataaatgaccaactggattcatggggaaatattttacataagttgatag 502
Query: 304 gccag 308
|||||
Sbjct: 503 gccag 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 709
Length adjustment: 9
Effective length of query: 301
Effective length of database: 700
Effective search space: 210700
Effective search space used: 210700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_e08.g1 MSMg01no267_e08.g1 CHROMAT_FILE:
MSMg01no267_e08.g1 PHD_FILE: MSMg01no267_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:17 2005
(525 letters)
>mm_chr2_65074016_65074940
Length = 925
Score = 888 bits (459), Expect = 0.0
Identities = 503/525 (95%), Gaps = 14/525 (2%)
Strand = Plus / Minus
Query: 1 gaatcggttcttctaaacaaaataggtgaggccggagagctcggtgatgaaatataaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 906 gaatcggttcttctaaacaaaataggtgaggccggagagctcggtgatgaaatat--aga 849
Query: 61 gctttctagtgacaagcctagaataccccgggttttatgcttgagaacttgggggctaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gctttctagtgacaagcctagaataccccgggttttatgcttgagaacttgggggctaaa 789
Query: 121 caaatgagttccttgaaagtatgcatatatttaattgcttgatgac-ttatttatttatt 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 788 caaatgagttccttgaaagtatgcatatatttaattgcttgatgactttatttatttatt 729
Query: 180 tatttatttggcagcgactcctttaggctaggctggtctgcaactgcatttatattttag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 728 tatttatttggcagcgactcctttaggctaggctggtctgcaactgcatttatagttgag 669
Query: 240 ttttacctcctgcctctgcctcccaaaattgaggttacaggaatacaccactgcacccta 299
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ggttacctcttgtttctgcctcccaaaattgaggttacaggaatacaccactgcacccta 609
Query: 300 aagaggaaaatattttaaagaacctttgtgcttacctttcaaacttcagggaagatatct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aagaggaaaatattttaaagaacctttgtgcttacctttcaaacttcagggaagatatct 549
Query: 360 gggaaaatgctcctgtaaataaactgccataatacctaatagtattcttttaagaaaaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gggaaaatgctcctgtaaataaactgccataatacctaatagtattcttttaag------ 495
Query: 420 aaaaaaaaaaaaaaaagagcttctagtggcttgccctctcccacttgtctattccaagtg 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 -----aaaaaaaaaaagagcttctagtggcttgccctctcccacttgtctattccaagtg 440
Query: 480 cctgtcatgtctgatgagtattcaggattagtgtttgcttattct 524
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 439 cctgtcatgtctgatgagtattcaggattagtgtttgctttttct 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
