Query= MSMg01no269_c06.b1 MSMg01no269_c06.b1 CHROMAT_FILE:
MSMg01no269_c06.b1 PHD_FILE: MSMg01no269_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:32 2005
(324 letters)
>mm_chr2_114642259_114642982
Length = 724
Score = 605 bits (313), Expect = e-177
Identities = 319/321 (99%)
Strand = Plus / Minus
Query: 4 ggaattctctggagtgtattaaattaaactgacagcgttgatatcgctattcatgttgaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ggaattctctggagtgtattaaattaaactgacagcgttgatatcgctattcatgttgaa 465
Query: 64 ataattagcaattctaaggctattaatggtgtattgtatcactgttttagaattggtagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ataattagcaattctaaggctattaatggtgtattgtatcactgttttagaattggtagg 405
Query: 124 atgaatgcaaaaaccttttggtgacttttgctcccactaaaatttaattagcctcagtta 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atgaatgcaagaaccttttggtgacttttgctcccactaaaatttaattagcctcagtta 345
Query: 184 ctgacctcatgttttatgtaacagtacacttcgcaatgatctcataaagaattgaagttt 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctgaccccatgttttatgtaacagtacacttcgcaatgatctcataaagaattgaagttt 285
Query: 244 gggaagaaagtcattcttactttaaaaactagcatcacataaaagttctctgagtgtttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gggaagaaagtcattcttactttaaaaactagcatcacataaaagttctctgagtgtttt 225
Query: 304 ttaactacttttgcaaagtat 324
|||||||||||||||||||||
Sbjct: 224 ttaactacttttgcaaagtat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_c06.g1 MSMg01no269_c06.g1 CHROMAT_FILE:
MSMg01no269_c06.g1 PHD_FILE: MSMg01no269_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:32 2005
(292 letters)
>mm_chr2_114517678_114518369
Length = 692
Score = 514 bits (266), Expect = e-150
Identities = 282/291 (96%), Gaps = 7/291 (2%)
Strand = Plus / Plus
Query: 1 aaacccagagctcaaccccaccctagtgagtggtctcaggttataatctgccgcctcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aaacccagagctcaaccccaccctagtgagtggtctcaggttataatctgctgcctcatt 260
Query: 61 tatcttatgctgctcctctgccatactccctgagtggtaggaaatgtctaaggcaataac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatcttatgctgctcctctgccatactccctgagtggtaggaaatgtctaaggcaataac 320
Query: 121 atccatcagcaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atccatcagcaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt------ 374
Query: 181 ttgtacatgtgtgtcangagtggttaaaaactcacacaaatactctgagatgtggcatct 240
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 375 ttgtacatgtgtgtcaggagtggttaaaa-ctcacacaaatactctgagatgtggcatct 433
Query: 241 gattaaaagttatgaaatctcagaaatgaagttctgaggatgttaagcaag 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gattaaaagttatgaaatctcagaaatgaagttctgaggatgttaagcaag 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
