Query= MSMg01no269_h02.b1 MSMg01no269_h02.b1 CHROMAT_FILE:
MSMg01no269_h02.b1 PHD_FILE: MSMg01no269_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:55 2005
(681 letters)
>mm_chr2_124642312_124643391
Length = 1080
Score = 1301 bits (673), Expect = 0.0
Identities = 676/677 (99%), Gaps = 1/677 (0%)
Strand = Plus / Minus
Query: 5 gaattcaatattttcatacattgcaagtaaaagttgtgtgcatctgaaactaattattta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 gaattcaatattttcatacattgcaagtaaaagttgtgtgcatctgaaactaattattta 821
Query: 65 ggctctcgagattgctctttaattacttgaccagggaatgtttatgtgacttaaacatta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 ggctctcgagattgctctttaattacttgaccagggaatgtttatgtgacttaaacatta 761
Query: 125 gcttcaatattcttgatcaaacgttttaggctgttggaagagcacatcacattgatttta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gcttcaatattcttgatcaaacgttttaggctgttggaagagcacatcacattgatttta 701
Query: 185 tggtcaaacaaatggttgagaagttcctttgaaagtggtccagaaaaggaaaatagactt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tggtcaaacaaatggttgagaagttcctttgaaagtggtccagaaaaggaaaatagactt 641
Query: 245 catactggttgattcaagggaaggatcatgtacagggaatgctaaggtccattatcaact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 catactggttgattcaagggaaggatcatgtacagggaatgctaaggtccattatcaact 581
Query: 305 agcatcttggtgggatacagagccccagagggtcctctaggggtactttctagaaggaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 agcatcttggtgggatacagagccccagagggtcctctaggggtactttctagaaggaga 521
Query: 365 aattatgagttatcaatttcctttagtacttgagatccatccttggggggtaccattgtt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aattatgagttatcaatttcctttagtacttgagatccatccttggggggtaccattgtt 461
Query: 425 agtacaggagacccagtagcaaacaggctattacagtaacccacacggcggtgactagcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agtacaggagacccagtagcaaacaggctattacagtaacccacacggcggtgactagcc 401
Query: 485 atctattcattttaatttcttgggtaattggtttcatctattagcagtcagcctcatatc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 atctattcattttaatttcttgggtaattggtttcatctattagcagtcagcctcatatc 341
Query: 545 taagccacaaatgacttttctccattaaaaaaaaaaagtctttcctcttgggtgtgatgg 604
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 340 taagccacaaatgacttttctccatt-aaaaaaaaaagtctttcctcttgggtgtgatgg 282
Query: 605 tcaactaagccaataagcctggtggattttgctagcttcttatatcagtgacttcagaca 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcaactaagccaataagcctggtggattttgctagcttcttatatcagtgacttcagaca 222
Query: 665 ctgcagggattgctaaa 681
|||||||||||||||||
Sbjct: 221 ctgcagggattgctaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1080
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1070
Effective search space: 717970
Effective search space used: 717970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_h02.g1 MSMg01no269_h02.g1 CHROMAT_FILE:
MSMg01no269_h02.g1 PHD_FILE: MSMg01no269_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:55 2005
(663 letters)
>mm_chr2_124494042_124495104
Length = 1063
Score = 1237 bits (640), Expect = 0.0
Identities = 657/663 (99%)
Strand = Plus / Plus
Query: 1 cctaaatattcatgtaggaggtgaaagtaggattctgtttcatttcccttagcatgcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctaaatattcatgtaggaggtgaaagtaggattctgtttcatttcccttagcatgcaac 260
Query: 61 tagctgtgagggcagccaacattagccttatggttgggcacaatgccctctctgatatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 tagctgtgagggcagccaacattagccttatggttgggcacaatgccctctctgatagag 320
Query: 121 cagtcatattgcctctgcctgtttggtaccaacagcttctcctggccaaagcctacctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtcatattgcctctgcctgtttggtaccaacagcttctcctggccaaagcctacctgc 380
Query: 181 agctctcataaggcctttgtcaaagaacctcagaagcatcttaggcagagcagtagacac 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctctcctaaggcctttgtcaaagaacctcagaagcatcttaggcagagcagtagacac 440
Query: 241 tgacatatcccatcaagggtttcactcttttcatggtgtcctttaaccaagggttggaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgacatatcccatcaagggtttcactcttttcatggtgtcctttaaccaagggttggaga 500
Query: 301 cacctgtacctgagcattcattcattggtacgagatgccttcgttccctttgtatatcca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 cacctgtacctgagcattcattcattggtacgagatgccttcgttccctttgcatatcca 560
Query: 361 acagtccagagagacgaagaatcacagatgcctggcctatggctgtagctcagtcaaata 420
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 acagtccagagagacgaagaatcacagaaacctggcctatggctgtagctcagtcaaata 620
Query: 421 cttacctagtatgctgctagtctccattctcatgaatgcatcaacagagtgtgactctgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttacctagtatgctgctagtctccattctcatgaatgcatcaacagagtgtgactctgt 680
Query: 481 gcctgcagccgtagttattgggaaataactaagcaagatgatcagaaattcgagacaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcctgcagccgtagttattgggaaataactaagcaagatgatcagaaattcgagacaatc 740
Query: 541 cttgtctgcatactagggtcaaggctagctaanaagaaaaatcctttctttcaggaattc 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 741 cttgtctgcatactagggtcaaggctagctaaaaagaaaaatcctttctttcaggaattc 800
Query: 601 tttgaaaatcagctggtgaaagcacatttgttcattttgggagctagcagctctgcagta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttgaaaatcagctggtgaaagcacatttgttcattttgggagctagcagctctgcagta 860
Query: 661 gca 663
|||
Sbjct: 861 gca 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
