ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTAGAGAAAAACCTTAAATAGATGAGAAGCATGTAAAGAAATGTCCG
AATTTCTCAGTCATCAAAGAAATGCAAATCAAAACAACTCTGGGATTTCT
ACTTATACCCATCAGTATGGCTAAGATAAAGATCTCAATGGACAATACAT
GCTGGCACAGATGTGGAGCAAGGACATTCCTCCATTATTGATGGGAATGC
AACCTTGTACAACCACTCTGGAAATCAATCTGGTAGTTTCTCAGAAAAAC
TGGGACCAGCTATACCACTCCTGGGCATATACCCGAAAGATACTTGACCA
TCCCAAAAGGACTCTTGCTCACACATGTCCATAGAAGCTTTATTCATAAA
AGCCAGAAACTGGAAGCAATCCAGATGTCCCTCAACTGAATAATGCATAA
TGAAAATTTGGTTCATTTACACAATGGAATACTATTCAGATGTTAAAAAT
GACACTATAAATTTTGCAGGTAAATGGATGGAACTAGAACATATCATTCT
CAGTGAGGTAACCCAGACATAAAATGACATGCATGGTATAAAATCACTGA
TCAGTGGATATTAATCATAAAAAACATGCTAACTACACTACAATCCACAG
ACCCAAAGAAGCCAAATAACAAGGAGGCTCCAAGGGAAGATACTTGACTC
ATTCCCAGCAGGGGAAATAAAATA

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTCAGCACTGACTACCATACCTGAAA
TGAAACATGTCCTCTTTACTCTATCAGTTAATTAAGTATCAACATTAATG
ATGTTAAAAAAATAAAAATTAATATTAAAATACAGTCCCCATAAAAGAGT
TAGAAATAAATTTTCTTCTTTGTCTTCACCCATATTCAGCTCTGCCTGAG
AAAACACTCTTCAAATATGCCTCTTCAGTCAAAGTGCACTGAACTAAGAT
CTACCCTCGAATGTCTTTTTAGAAGCAGCATGTAAGGCTTGCTACAGGGA
ATTTTTTTATATGGACACAGAGATATCTAACCGGAATATCTAATAATGAA
AGTGGGTAGCACACTGAATTCTTACTGCAGGTCCTGTATGTGGCCAACTA
GTTTATGGTCTGGTTGGTTCTCATGTTAAGTTACTATCATCAATAGCATT
AGACAGGTGGTTTTCTGAGAAGGCATGTGCAGAAAGAGGAAGCTGTAGGA
GAGGGATGTGAGCAGTATGCAAGGTGTGCTGTGTCTTCACAGGGCAAAGG
GGAGACATGCTTGCCTTGTCTTGTGTGTCTACTTAAGAGAATACTTGAGT
GGTTTGCATTTTGAAATATTCAGTCTTTTTAATTTACTTCCAAATAATTT
GTCTCGACATTATGCTGCTTTGTCTGTGGAGAACAATN

Query= MSMg01no270_a14.g1 MSMg01no270_a14.g1 CHROMAT_FILE:
MSMg01no270_a14.g1 PHD_FILE: MSMg01no270_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:36 2005
         (609 letters)



>mm_chr2_123930599_123931604
          Length = 1006

 Score = 1139 bits (589), Expect = 0.0
 Identities = 603/609 (99%), Gaps = 3/609 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcagttaattaagtatcaacattaatgatgttaaaaaaataaaaattaatattaaaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcagttaattaagtatcaacattaatgatgttaaaaaaataaaaattaatattaaaata 260

                                                                       
Query: 61  cagtccccataaaagagttagaaataaattttcttctttgtcttcacccatattcagctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtccccataaaagagttagaaataaattttcttctttgtcttcacccatattcagctc 320

                                                                       
Query: 121 tgcctgagaaaacactcttcaaatatgcctcttcagtcaaagtgcactgaactaagatct 180
           |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcctgagaaaacactc---aaatatgcctcttcagtcaaagtgcactgaactaagatct 377

                                                                       
Query: 181 accctcgaatgtctttttagaagcagcatgtaaggcttgctacagggaatttttttatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 accctcgaatgtctttttagaagcagcatgtaaggcttgctacagggaatttttttatat 437

                                                                       
Query: 241 ggacacagagatatctaaccggaatatctaataatgaaagtgggtagcacactgaattct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggacacagagatatctaaccggaatatctaataatgaaagtgggtagcacactgaattct 497

                                                                       
Query: 301 tactgcaggtcctgtatgtggccaactagtttatggtctggttggttctcatgttaagtt 360
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 498 tactgcaggtcctgtatgtggccaactagtttatggtctgattggttctcatgttaagtt 557

                                                                       
Query: 361 actatcatcaatagcattagacaggtggttttctgagaaggcatgtgcagaaagaggaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 actatcatcaatagcattagacaggtggttttctgagaaggcatgtgcagaaagaggaag 617

                                                                       
Query: 421 ctgtaggagagggatgtgagcagtatgcaaggtgtgctgtgtcttcacagggcaaagggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 618 ctgtaggagagggatgtgagcagtatgcaaggtgtgctgtgtcttcacagggctaagggg 677

                                                                       
Query: 481 agacatgcttgccttgtcttgtgtgtctacttaagagaatacttgagtggtttgcatttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 agacatgcttgccttgtcttgtgtgtctacttaagagaatacttgagtggtttgcatttt 737

                                                                       
Query: 541 gaaatattcagtctttttaatttacttccaaataatttgtctcgacattatgctgctttg 600
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gaaatattcggtctttttaatttacttccaaataatttgtctcgacattatgctgctttg 797

                    
Query: 601 tctgtggag 609
           |||||||||
Sbjct: 798 tctgtggag 806


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1006
Length adjustment: 10
Effective length of query: 599
Effective length of database: 996
Effective search space:   596604
Effective search space used:   596604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)