Query= MSMg01no270_b07.b1 MSMg01no270_b07.b1 CHROMAT_FILE:
MSMg01no270_b07.b1 PHD_FILE: MSMg01no270_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:39 2005
(696 letters)
>mm_chr2_8136705_8137800
Length = 1096
Score = 1255 bits (649), Expect = 0.0
Identities = 681/692 (98%)
Strand = Plus / Minus
Query: 5 gaattcctgtagaccctgaggtttgaaacggtctttcgatgagtggaaacaaaggcattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gaattcctgtagaccctgaggtttgaaacggtctttcgatgagtggaaacaaaggcattt 837
Query: 65 ctgggttgtaaccaggactgaaccacccccagagaacagatggcagcagatttaatgttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ctgggttgtaaccaggactgaaccacccccagagaacagatggcagcagatttaatgttc 777
Query: 125 cggaaagacctccttgtcttaggcttttcctactagtggctgccctgagtagttattttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 cggaaagacctccttgtcttaggcttttcctactagtggctgccctgagtagttattttg 717
Query: 185 ccccacttacatttagtagtgttgatcactgctaattttatcccttctttcattggacat 244
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 716 ccccacttgcatttagtagtgttgatcactgccaattttatcccttctttcattggacat 657
Query: 245 tttctaagtcttgctccattgataggatctgtcaaaggtgcttgaatactgaggtcagag 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 656 tttctaagtcttgctccattgataggatctgtaaaaggtgcttgaatactgaggtcagag 597
Query: 305 tttcagttctgcttagaagtatttcagagtctagagaaggagataataaagtaactttag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tttcagttctgcttagaagtatttcagagtctagagaaggagataataaagtaactttag 537
Query: 365 agcagcacttaacaagaatgagacttaacagggtacttaaccgagaaacatgcagcccaa 424
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 536 aacagcacttaacaagaatgagacttaacagggtacttcaccgagaaacatgcagcccaa 477
Query: 425 ggaaggaagaatgtcatagctccacttgaagtatgcatagatgtaactgtaaagagtata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ggaaggaagaatgtcatagctccacttgaagtatgcatagatgtaactgtaaagagtata 417
Query: 485 aaggtttgccaagaaagaaatcaatatggaaatgacgagaagcacatgaatagttttaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaggtttgccaagaaagaaatcaatatggaaatgacgagaagcacatgaatagttttaga 357
Query: 545 ttcaagactcaacaagcatatttctatgcctaanatggaagaatggacggagtggcagag 604
||| |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 356 ttcgagactcaacaggcatatttctatgcctaaaatggaagaatggacagagtggcagag 297
Query: 605 agtcctgttctacaaacaaaactcagaagacagagaacaatgagttaaagaacagcagga 664
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agtcctgttctacaaacaaagctcagaagacagagaacaatgagttaaagaacagcagga 237
Query: 665 agattaagtcttcattatcagcctttgctttt 696
| ||||||||||||||||||||||||||||||
Sbjct: 236 aaattaagtcttcattatcagcctttgctttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_b07.g1 MSMg01no270_b07.g1 CHROMAT_FILE:
MSMg01no270_b07.g1 PHD_FILE: MSMg01no270_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:40 2005
(668 letters)
>mm_chr2_7974764_7975833
Length = 1070
Score = 1201 bits (621), Expect = 0.0
Identities = 657/669 (98%), Gaps = 2/669 (0%)
Strand = Plus / Plus
Query: 1 tctttggaatattcaatttttcaacatcaccttgcttattggatccaccattaagcaaag 60
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 201 tctttggaatattcaatttttcaacatcaccttgcttattggagccactattaagcaaag 260
Query: 61 caagtattcttgaatatgcacatgcattctcacgtgagcacacacacacagatacacata 120
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 caagtattcctgaatatgcacatgcattctcacgtgagcacacacacacagatacacaca 320
Query: 121 tattcttgattgtgatgatgatagagatggttactaaatgactatgagtaggcagtcgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattcttgattgtgatgatgatagagatggttactaaatgactatgagtaggcagtcgat 380
Query: 181 acagcatggatagactggatcattcacatactgggaggatggagcaaaagttatgcaaaa 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 acagcatggatagactggatcattcacatactgggaggatggaacaaaagttatgcaaaa 440
Query: 241 ttcccttatgttatttagacggctaggaaaatgtaaactaatgaacgtttatgaattttc 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcccttatgtcatttagacggctaggaaaatgtaaactaatgaacgtttatgaattttc 500
Query: 301 atttaatatttctacactaatgttgagcataaatacaagaaggtgtgaaaagtggacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttaatatttctacactaatgttgagcataaatacaagaaggtgtgaaaagtggacatg 560
Query: 361 gctttcaaattcagaaggggcaatagataagcatcagattttagaagatgagtcagagta 420
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttttcaagttcagaaggggcaatagataagcatcagattttagaagatgagtcagagta 620
Query: 421 gtatcctatcaggaagctctaggtctctcag-atagcctgtaccttcacaagcactctcc 479
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 gtatcctatcaggaagctctaggtctctcaggatagcctgtaccttcacaagcactctcc 680
Query: 480 atatcacacggatcttacttgaacaatcatgttactgtgagcaaaatcagagctcttgtt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atatcacacggatcttacttgaacaatcatgttactgtgagcaaaatcagagctcttgtt 740
Query: 540 ccactgtctaactgtcttcctgtggtctacatgtctgataactatactgtttttttttt- 598
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cccctgtctaactgtcttcctgtggtctacatgtctgataactatactgttttttttttt 800
Query: 599 accaaaaattatatttgatagaatatgaaaagctagcctagagagcaaaattgcaaatag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 801 accaaaaattatatttgatagaatatgaaaagctagcctagagagcaaaattgtaaatag 860
Query: 659 tgatgcttt 667
|||||||||
Sbjct: 861 tgatgcttt 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1070
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1060
Effective search space: 697480
Effective search space used: 697480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
