XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTTTTTTTTTTTTTTTTTGGCAAGTGTATAACATGGTAAATTATACTTC
TTCCAGAACTTCAGTCACTTTGGAAGGGGGGAGTTGCAAAGAGGTTAAAG
AGCCATTTTGCAGACAAAACAATTTCAGAAAAATATTTAGCTTACTGATG
TTACAAAAGATGTTAATATTCATGTTTGTGCTTTTAATTTAAAAAGAAAT
TTATTTTAAAAGAAGATACAACCTTGCAGTTCCATTGAGATCAAAATTTT
CATATACCCTTTTGTAACAGATGTCATTAAAATTTGATTCTTTATAAAAG
CAAGATAGTAAATAGCAACTTTTCTTAAAAGTCAGACAGGCTATTTATAA
TCACTTAATAGTATGATTTTCCATTCCTTAAAAACTGAAAAATATGTATC
AACATTCTTCCTAAAATTGTGCATACTAATGTCAAAAATTAAAAGAACTC
CCAACAGAATCACCAGGCATGAAGGCTTTGATTGGATTGGATGCTGTATT
AAAGTTACCGCAACTTTCTGTCTCAATAGAAGAACATTTCCTTTTATATT
TTTCCACACAAAACCACAATTTAACATGTTTTCTAAAGTAAAAGTAATTT
TTAACATTTTTGTTTGTGAAACTTGCAATTTTGTTTGTAAAGACATTAAA
TGTTTATAANACTAANAGAAGTATAGAGACTGGGATC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTCATACCATCCACCCTCCTCTTT
GCCTCTGAGAGGGCTCTCCACCCCACCCCCACCCCTCCCCACACCCCTCC
CCCTCCGCCACCCCTCTTCTCTGGGGCATCAAGTTTCTACAGGAAACTTG
CCTTTACCATTGAGGTCAGGCAAGGCAGTCCTCTGCTATATATGTGCTGG
GGAGGCAGGGGTGGGGTGGGGTGGTGGNNNNNNNNNGGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNNNNNNNNNNNNNNN
NNNNNNGNNNNNNNNNNNNNNNNNNN

Query= MSMg01no270_e05.b1 MSMg01no270_e05.b1 CHROMAT_FILE:
MSMg01no270_e05.b1 PHD_FILE: MSMg01no270_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:52 2005
         (646 letters)



>mm_chr2_83847161_83848206
          Length = 1046

 Score = 1201 bits (621), Expect = 0.0
 Identities = 624/625 (99%)
 Strand = Plus / Minus

                                                                        
Query: 22   ttttttttggcaagtgtataacatggtaaattatacttcttccagaacttcagtcacttt 81
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 ttttttttggcaagtgtataacatggtaaattatacttcttccagaacttcagtcacttt 987

                                                                        
Query: 82   ggaaggggggagttgcaaagaggttaaagagccattttgcagacaaaacaatttcagaaa 141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986  ggaaggggggagttgcaaagaggttaaagagccattttgcagacaaaacaatttcagaaa 927

                                                                        
Query: 142  aatatttagcttactgatgttacaaaagatgttaatattcatgtttgtgcttttaattta 201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926  aatatttagcttactgatgttacaaaagatgttaatattcatgtttgtgcttttaattta 867

                                                                        
Query: 202  aaaagaaatttattttaaaagaagatacaaccttgcagttccattgagatcaaaattttc 261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866  aaaagaaatttattttaaaagaagatacaaccttgcagttccattgagatcaaaattttc 807

                                                                        
Query: 262  atatacccttttgtaacagatgtcattaaaatttgattctttataaaagcaagatagtaa 321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806  atatacccttttgtaacagatgtcattaaaatttgattctttataaaagcaagatagtaa 747

                                                                        
Query: 322  atagcaacttttcttaaaagtcagacaggctatttataatcacttaatagtatgattttc 381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746  atagcaacttttcttaaaagtcagacaggctatttataatcacttaatagtatgattttc 687

                                                                        
Query: 382  cattccttaaaaactgaaaaatatgtatcaacattcttcctaaaattgtgcatactaatg 441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686  cattccttaaaaactgaaaaatatgtatcaacattcttcctaaaattgtgcatactaatg 627

                                                                        
Query: 442  tcaaaaattaaaagaactcccaacagaatcaccaggcatgaaggctttgattggattgga 501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626  tcaaaaattaaaagaactcccaacagaatcaccaggcatgaaggctttgattggattgga 567

                                                                        
Query: 502  tgctgtattaaagttaccgcaactttctgtctcaatagaagaacatttccttttatattt 561
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566  tgctgtattaaagttactgcaactttctgtctcaatagaagaacatttccttttatattt 507

                                                                        
Query: 562  ttccacacaaaaccacaatttaacatgttttctaaagtaaaagtaatttttaacattttt 621
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506  ttccacacaaaaccacaatttaacatgttttctaaagtaaaagtaatttttaacattttt 447

                                     
Query: 622  gtttgtgaaacttgcaattttgttt 646
            |||||||||||||||||||||||||
Sbjct: 446  gtttgtgaaacttgcaattttgttt 422


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)