Query= MSMg01no272_b05.b1 MSMg01no272_b05.b1 CHROMAT_FILE:
MSMg01no272_b05.b1 PHD_FILE: MSMg01no272_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:07 2005
(385 letters)
>mm_chr2_153166665_153167449
Length = 785
Score = 646 bits (334), Expect = 0.0
Identities = 370/386 (95%), Gaps = 8/386 (2%)
Strand = Plus / Plus
Query: 1 ttaaaaattagaaatgagtctttaatgaagaaatttctaccagaaaactttattctgtca 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 ttaaaaattagaaatgagtctttaatgaggaaatttctaccagaaaactttattctgtca 260
Query: 61 ggaaatgtcatgtcccaaaattttgataaaaaccagcttaaatctccctttgaggccact 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ggaaatgtcatgtcccaaaattttgataaaaaccagcttaagtctccctttgaggccact 320
Query: 121 ctacaggtccaccaaagtgggaagaagaatctattattaaagatggtcttccactgttgg 180
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 321 ctacaggtccaccaaagtgggaagatgaatctattattaaagatgttcttccactattgg 380
Query: 181 ctgatattaatgaaactttacttttacatcataatggagcacacattctagatttggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgatattaatgaaactttacttttacatcataatggagcacacattctagatttggaag 440
Query: 241 atgtgacagaaaaaataaaaaatatatttactatatcactattataactgccactttaaa 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtgacagaaaaaata-------tatttactatatcactattataactgccactttaaa 493
Query: 301 tgttt-attgtttttgaagtaaaaacttttaaagttaacataatgcaattttttggcaag 359
||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 494 tgttttattgtttttgaagtaaaaacttttaaagttaaaataatgcaattttttagcaag 553
Query: 360 tatttttttttaagatttatttattt 385
|||||||||| |||||||||||||||
Sbjct: 554 tattttttttaaagatttatttattt 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_b05.g1 MSMg01no272_b05.g1 CHROMAT_FILE:
MSMg01no272_b05.g1 PHD_FILE: MSMg01no272_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:07 2005
(290 letters)
>mm_chr2_153298361_153299050
Length = 690
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%)
Strand = Plus / Minus
Query: 1 catacttcttggccagaaacatcaggatttggagacaggaacatggcttctgcccaactg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 490 catacttcttggccagaaacatcaggatttggagacaggaacatggcttctgtctaactg 431
Query: 61 cacctcagtgtccctggaacactgaggacctaatgtgttgcttccaaccctgtcagtctt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 430 cacctcagtgtccctggaacactgaggacctaatatgttgcttccaaccctgtcagtctt 371
Query: 121 tgtggaatgaggcctaaaagctccctggggttaaagaagtcaagtctaggttgatggtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgtggaatgaggcctaaaagctccctggggttaaagaagtcaagtctaggttgatggtgg 311
Query: 181 tctattgaagaaaagggggaacaagagccagctccattttctaacaggctaggcccatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tctattgaagaaaagggggaacaagagccagctccattttctaacaggctaggcccatgt 251
Query: 241 gcacaggattccctactccacccagaaaagatagaaaataaggagcagcc 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcacaggattccctactccacccagaaaagatagaaaataaggagcagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
