Query= MSMg01no272_i24.b1 MSMg01no272_i24.b1 CHROMAT_FILE:
MSMg01no272_i24.b1 PHD_FILE: MSMg01no272_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:45 2005
(309 letters)
>mm_chr2_98051117_98051825
Length = 709
Score = 567 bits (293), Expect = e-166
Identities = 305/309 (98%)
Strand = Plus / Minus
Query: 1 aaatacagaaacatactcagtgacttactttcaaaggtcccgattctcaagcaggttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aaatacagaaacatactcagtgacttactttcaaaggtcccgattctcaagcaggttctg 450
Query: 61 aaacagaaactgtggaccagaacacatggcttcttccttaattgttttattctgaggttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaacagaaactgtggaccagaacacatggcttcttccttaattgttttattctgaggttc 390
Query: 121 ataactctaatatccattaacccaggaatatgtagtgactctcagtcctcaaattgatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ataactctaatatccattaacccaggaatatgtagtgactctcagtcctcaaattgatat 330
Query: 181 cctaaatgaaagtactgaaacttaatagtatttcaactctatttcttatgaaatattatc 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 329 cctaaatgaaagtactgaaacttaatagtatttcaactctatttcttatcaaatattatc 270
Query: 241 tcaattttatttctgtctctgtgacaaaatgtcctctcataaaggaacaaaagggaggag 300
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
Sbjct: 269 tcaattttatttctgtctctgtgataaaatgtcctctcataaaggaacaaatgggagggg 210
Query: 301 tctttagct 309
|||||||||
Sbjct: 209 tctttagct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_i24.g1 MSMg01no272_i24.g1 CHROMAT_FILE:
MSMg01no272_i24.g1 PHD_FILE: MSMg01no272_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:45 2005
(247 letters)
>mm_chr2_97900269_97900915
Length = 647
Score = 456 bits (236), Expect = e-133
Identities = 243/246 (98%), Gaps = 2/246 (0%)
Strand = Plus / Plus
Query: 4 ttttagctctgtaccccatttttaaaaatgagtttaagaggtcaaataagtttttaaatc 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 204 ttttagctctgtaccccatttttaaaaatgagtttaagaggtcaaataagtttttaaagc 263
Query: 64 acttctaagtgtgggacttcttaaaataaaatgccaaaagaaaaaaataatagggaaaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acttctaagtgtgggacttcttaaaataaaatgccaaaagaaaaaaataatagggaaaaa 323
Query: 124 gacaca--tatattaacatcctctaaagtcacacaaaataggaaagtccatgagaagcat 181
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gacacacatatattaacatcctctaaagtcacacaaaataggaaagtccatgagaagcat 383
Query: 182 gattgttgaagcttacataccttcttcataagaaaggaagcaaatgtaaggggggctgac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gattgttgaagcttacataccttcttcataagaaaggaagcaaatgtaaggggggctgac 443
Query: 242 catttt 247
||||||
Sbjct: 444 catttt 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
