Query= MSMg01no272_n21.b1 MSMg01no272_n21.b1 CHROMAT_FILE:
MSMg01no272_n21.b1 PHD_FILE: MSMg01no272_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:07 2005
(669 letters)
>mm_chr2_122463609_122464677
Length = 1069
Score = 1243 bits (643), Expect = 0.0
Identities = 661/669 (98%), Gaps = 6/669 (0%)
Strand = Plus / Plus
Query: 4 ggaattctacactaaagtcatcatgggcgttttccagatattgatgaagaataaggaagt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctacactaaagtcatcatgggcgttttccagatattgatgaagaataaggaagt 263
Query: 64 aagtttctaatcttaacttctgagagttttcctttttaaaaagaggggaaagatgaagat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagtttctaatcttaacttctgagagttttcctttttaaaaagaggggaaagatgaagat 323
Query: 124 tttgaatttgttgttttttggagtttcttactgagtttatcccccacctgttctctctca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttgaatttgttgttttttggagtttcttactgagtttatcccccacctgttctctctca 383
Query: 184 gctcattcctttggcgttttttataagcgtggccgccaccggagccacatctttcgcttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gctcattcctttggcgttttttataagcgtggccgccaccggagccacatctttcgcttt 443
Query: 244 gtatgcgttgaaaaaaaccgacgtggtgtaagtactaacgctttctaggtaggactgtct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtatgcgttgaaaaaaaccgacgtggtgtaagtactaacgctttctaggtaggactgtct 503
Query: 304 gggggagcttttctctgacccggagattctgaaacacgctgtcagtgtctgggttttttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gggggagcttttctctgacccggagattctgaaacacgctgtcagtgtctgggttttttc 563
Query: 364 ctacaaataagagcatctaaacatggactgaaaaacagttctggtaacagaaagaaatgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctacaaataagagcatctaaacatggactgaaaaacagttctggtaacagaaagaaatgt 623
Query: 424 aaccaattctggttata--tttgtttcttat-gtctgaccctgcaatgaattagatttga 480
||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 624 aaccaattctg---atacatttgtttcttattgtctgaccctgcaatgaattagatttga 680
Query: 481 tttctttttaaatttaagctttgaaattgaagtacttaaaattaggggtacataccatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttctttttaaatttaagctttgaaattgaagtacttaaaattaggggtacataccatca 740
Query: 541 aacatcattaaagtttcaagatttcaacttttcttccctggtgtggtagaactgaaacat 600
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cacatcatttaagtttcaagatttcaacttttcttccctggtgtggtagaactgaaacat 800
Query: 601 acagctatctgcaacaaactctagtgtcaactttggaaaaaggacagtaaaaagccttat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acagctatctgcaacaaactctagtgtcaactttggaaaaaggacagtaaaaagccttat 860
Query: 661 ctcctggga 669
|||||||||
Sbjct: 861 ctcctggga 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_n21.g1 MSMg01no272_n21.g1 CHROMAT_FILE:
MSMg01no272_n21.g1 PHD_FILE: MSMg01no272_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:07 2005
(293 letters)
>mm_chr9_84862341_84863035
Length = 695
Score = 538 bits (278), Expect = e-157
Identities = 288/292 (98%), Gaps = 2/292 (0%)
Strand = Plus / Minus
Query: 1 tttgctttccctgtgcatttttctcccttaacgtgacctcagaaatgagcagtgtactgg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tttgctttccttgtgcatttttctcccttaacgtgacctcagaaatgagcagtgtactgg 433
Query: 61 cgatttttacatagtaggagatcttcttgtgtgtgtattgtgctgttaggtcactggtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cgatttttacatagtaggagatcttcttgtgtgtgtattgtgctgttaggtcactggtct 373
Query: 121 attgtttgtttattcatttctttatcatttttaccttttcag--aaaaaaaaagacagca 178
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 372 attgtttgtttattcatttctttatcatttttaccttttcagaaaaaaaaaaagacagca 313
Query: 179 tgtatgtgtgtgaagacatttaatatcaatcacactattcaattcaaaactgtaaagatc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgtatgtgtgtgaagacatttaatatcaatcacactattcaattcaaaactgtaaagatc 253
Query: 239 tgaatccctggacattagtaagctacgggtgagaacaacttgcaatatttta 290
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 252 tgaatccctggacattagtaagctacaggtgagaacaacttgcaatatttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 695
Length adjustment: 9
Effective length of query: 284
Effective length of database: 686
Effective search space: 194824
Effective search space used: 194824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
