Query= MSMg01no273_d12.b1 MSMg01no273_d12.b1 CHROMAT_FILE:
MSMg01no273_d12.b1 PHD_FILE: MSMg01no273_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:33 2005
(321 letters)
>mm_chr2_134474263_134474983
Length = 721
Score = 435 bits (225), Expect = e-126
Identities = 239/245 (97%), Gaps = 3/245 (1%)
Strand = Plus / Minus
Query: 73 cacacacacccatacacacatacacacacacacacacacacacacacacacatccttgga 132
|||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cacacaca---acacacacacacacacacacacacacacacacacacacacatccttgga 510
Query: 133 ggcaagttccctcctttacatgctgagccatcttgtccttaagggtctttttgacaaatt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggcaagttccctcctttacatgctgagccatcttgtccttaagggtctttttgacaaatt 450
Query: 193 aaagatagatacaatttcttttgctgcttcttactaaggggtcttgtctaattcttctcc 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaagatagatacaatttcttttgctgcttcttactaaggggtcttgtctaattcttctcc 390
Query: 253 ttgggttttaggttggcatttggcgcccctccccctactagaatgtggtagaagtgatat 312
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttgggttttaggttggcatttggtgcccctccccctactagaatgtggtagaagtgatat 330
Query: 313 tctca 317
|||||
Sbjct: 329 tctca 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_d12.g1 MSMg01no273_d12.g1 CHROMAT_FILE:
MSMg01no273_d12.g1 PHD_FILE: MSMg01no273_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:33 2005
(291 letters)
>mm_chr2_134307273_134307960
Length = 688
Score = 536 bits (277), Expect = e-157
Identities = 285/289 (98%), Gaps = 3/289 (1%)
Strand = Plus / Plus
Query: 1 tccttttataatgaaaagcctttaaatcttgagaaaatggaggcttaagcaaccgagctc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 tccttttataatgaaaagcctttaaatcttgagaaaatggagacttaagcaaccgagctc 260
Query: 61 aagcctagactcagatgctcagggaaagaggcttctaaactgttgttctactaacaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcctagactcagatgctcagggaaagaggcttctaaactgttgttctactaacaattt 320
Query: 121 agtgatcatttttcacggcgtagacagaagtcatgggctagcagatgacaacataatctg 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 agtgatcatttttcacggcgtagacagaagtcatgggctagcagatgaca---taatctg 377
Query: 181 gtattttaaaagatgtaagacatcaacaagtggatgtattgctgcacagcaccacctact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtattttaaaagatgtaagacatcaacaagtggatgtattgctgcacagcaccacctact 437
Query: 241 gaccagatgcggaacagacatgaatgagaacgggatccagagccccaga 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaccagatgcggaacagacatgaatgagaacgggatccagagccccaga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 688
Length adjustment: 9
Effective length of query: 282
Effective length of database: 679
Effective search space: 191478
Effective search space used: 191478
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
