XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTCTTATGTGAGGGTTAATTACTGCTGGAGCTTCAGGAATGGAGTTGGCC
AGGCCTTCTTTTTGCGGACAAAGCTCCCTCACCTGTTGTGGGAAGAGACT
GAGTCGTACCTTTCTGAAAGGGCTACTGAGGCCTGAGTTCTAGTCACCAG
TCGGTTAGAGAGTAAGGACGAGCGAGGACATGCATTCAGCCTAGCATAAG
ATGTTCAGGAGACAACCTAGACGGAAGCAGGTAACAATGTTGTAACTCTT
CATTCCACAGGCTTCTTATGATTGGTGGGACAAAGCTAGACATTGTGACC
AACTTTTTTGTTCCGCCTCCCCCCCCTCTTTCTTAGGTGTGTGGGGTTTA
AGCCCAATGACTTATGATAGAACGAAACTGCTTTCCTGCCGTCGTGGAGT
TTTCTGGCATGCACACTTTCCCAGAGGGAGCAAACCATCCATCAAGCACA
GAGCACAAAGCAGTCCTGTTTAACTTAGATGTAAAAACAAACGACAGCCC
CACAGTCACAGGACACGCTTCTCTAACCGGTTCCTCCAAAAACAAAACAC
AACACAACACAACAACAACAACTAGCCAACCAATGAATCAAAGATTTGCT
AGAAATTAAGCTCTTAACTTACACCCTGTCATTACATCCCAAGGTGAGGC
TATCTCATTTAGAAACTGACCTTGAAGAG

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCCACAGATCTTGGGAATTCAGGTGAG
TCTGGTGCTGTGGAGCTTACCTGCAGTCACAGCACTTGGGAGGCTGGTAC
AATAGCGTTCTGGAGACACAGATTTGAAACCAGTCATGCCACAATAGTGA
GACCTCGTCTCAAAGTCAGACACTGGAAATGTCAAACCAACAAGAGCCAG
TCTGGGTGAAAATTTCCGTAACACATGATCTTGGGGCAGGATCACCACAT
GGTGCTATAACCCACTGGACTGTGGGCGACAGGGCCCAGTTGCGTTCCTG
TCCCNNCTTTCCTCTGTGCAANGCCCATCTGTGGCATGTAATGCAAGAGA
AGAAGGTGACCTGACAAACAGAGATGCCGAAGGGAGATCAGAAAGAGCTG
TGTAGGAGCTCAAGAGCAGATGTTCTCATCACTGTGGCCTGGGGGCTGAG
GGGTCCTCAGTGGAGGGCTGGGACCAAGGGAAGGAAATGGCTTCCCTCGG
GATGGAGAATTTGATCTTTTGACTTCCTTCATTCCTTATCACCCGCTCCG
ATGGCTGAGGCTTTCCCCTTTCCGTGCGTTCCTTCTTATCTCTCCCGGCA
AACAGAAATGTCCGTGGAATGGCCCTGAGCTTAATTTACAACCCCAGGGA
TGGTCCTTGCTGGTACATGTTTTTTT

Query= MSMg01no273_e10.b1 MSMg01no273_e10.b1 CHROMAT_FILE:
MSMg01no273_e10.b1 PHD_FILE: MSMg01no273_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:37 2005
         (314 letters)



>mm_chr2_18675747_18676460
          Length = 714

 Score =  582 bits (301), Expect = e-171
 Identities = 307/309 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctcttatgtgagggttaattactgctggagcttcaggaatggagttggccaggc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcttatgtgagggttaattactgctggagcttcaggaatggagttggccaggc 264

                                                                       
Query: 65  cttctttttgcggacaaagctccctcacctgttgtgggaagagactgagtcgtacctttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttctttttgcggacaaagctccctcacctgttgtgggaagagactgagtcgtacctttc 324

                                                                       
Query: 125 tgaaagggctactgaggcctgagttctagtcaccagtcggttagagagtaaggacgagcg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaaagggctactgaggcctgagttctagtcaccagtcggttagagagtaaggacgagcg 384

                                                                       
Query: 185 aggacatgcattcagcctagcataagatgttcaggagacaacctagacggaagcaggtaa 244
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggacacgcattcagcctagcataagatgttcaggagacaacctagacggaagcaggtaa 444

                                                                       
Query: 245 caatgttgtaactcttcattccacaggcttcttatgattggtgggacaaagctagacatt 304
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 caatgttgtaactcttcattccacaggcttcatatgattggtgggacaaagctagacatt 504

                    
Query: 305 gtgaccaac 313
           |||||||||
Sbjct: 505 gtgaccaac 513


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space:   215025
Effective search space used:   215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no273_e10.g1 MSMg01no273_e10.g1 CHROMAT_FILE:
MSMg01no273_e10.g1 PHD_FILE: MSMg01no273_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:37 2005
         (286 letters)



>mm_chr2_18862375_18863060
          Length = 686

 Score =  484 bits (250), Expect = e-141
 Identities = 274/282 (97%)
 Strand = Plus / Minus

                                                                       
Query: 3   acccacagatcttgggaattcaggtgagtctggtgctgtggagcttacctgcagtcacag 62
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 634 acccacagatcttgggaattcaggtgagtctggtgctgtggagcttagctgcaatcacag 575

                                                                       
Query: 63  cacttgggaggctggtacaatagcgttctggagacacagatttgaaaccagtcatgccac 122
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 574 cacttgggaggctggtacaatagcgttctggagacacagattcgaaaccagtcatggcac 515

                                                                       
Query: 123 aatagtgagacctcgtctcaaagtcagacactggaaatgtcaaaccaacaagagccagtc 182
           | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 514 agtagtgagacctcgtctcaaagccagacactggaaatgtcaaaccaacaagagccagtc 455

                                                                       
Query: 183 tgggtgaaaatttccgtaacacatgatcttggggcaggatcaccacatggtgctataacc 242
           |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 454 tgggtgaaaatttccgtaacacatgatcttggggcaagatcaccacatggtgctgtaacc 395

                                                     
Query: 243 cactggactgtgggcgacagggcccagttgcgttcctgtccc 284
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cactggactgtgggcgacagggcccagttgcgttcctgtccc 353


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space:   187529
Effective search space used:   187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)