Query= MSMg01no273_m07.b1 MSMg01no273_m07.b1 CHROMAT_FILE:
MSMg01no273_m07.b1 PHD_FILE: MSMg01no273_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:12 2005
(313 letters)
>mm_chr2_67559191_67559903
Length = 713
Score = 590 bits (305), Expect = e-173
Identities = 308/309 (99%)
Strand = Plus / Plus
Query: 5 gaattcaatacatttcaagaaaaaagtgtatagtttgattattgggagtgagcatccctc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatacatttcaagaaaaaagtgtatagtttgattattgggagtgagcatccctc 264
Query: 65 accagcttatacagttggatgcctcagatgcaaattagagcaaagtgacctgcagttatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accagcttatacagttggatgcctcagatgcaaattagagcaaagtgacctgcagttatg 324
Query: 125 gcaatgaccagtaggtcgaagtcacatgcgcccacatgtagaactttggtttctggtttt 184
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 gcaatgaccagtaggtcgaagtcacatgcacccacatgtagaactttggtttctggtttt 384
Query: 185 tagttgagtgaccttcaattgcctaaaatttctgatgccctgctttcttatcagacaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagttgagtgaccttcaattgcctaaaatttctgatgccctgctttcttatcagacaaag 444
Query: 245 atgcggatgcagagtgtttatgtaaaccaagaatctaatatctattgggaggcagagggt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgcggatgcagagtgtttatgtaaaccaagaatctaatatctattgggaggcagagggt 504
Query: 305 aacacggag 313
|||||||||
Sbjct: 505 aacacggag 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_m07.g1 MSMg01no273_m07.g1 CHROMAT_FILE:
MSMg01no273_m07.g1 PHD_FILE: MSMg01no273_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:12 2005
(289 letters)
>mm_chr2_67708759_67709448
Length = 690
Score = 503 bits (260), Expect = e-147
Identities = 281/288 (97%), Gaps = 3/288 (1%)
Strand = Plus / Minus
Query: 1 cagaaaaaggtagacccccaagttcag-agataactcccccaaatctagacagggagata 59
||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||
Sbjct: 487 cagaaaaaggtagaccccccagttcagaagataactcccccaaatctagagaaggagata 428
Query: 60 tttactcagggatatgaggtcatagcacacaaaatatgcacagaaaagatatttctcata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tttactcagggatatgaggtcatagcacacaaaatatgcacagaaaagatatttctcata 368
Query: 120 acttattgtggttgaaaccataaaaacatcgactaaaggagcac-gtcaaattctgccaa 178
||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct: 367 acttattgtggttgaaaccataaaaacctcgactaaaggagcacag-caaattctgccaa 309
Query: 179 atctcctatgaaagcacagccatcattcaatgggcatgagaatgtttgttgttctacttt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atctcctatgaaagcacagccatcattcaatgggcatgagaatgtttgttgttctacttt 249
Query: 239 tgggaagattaaaactacgatccagattattatacccaccaaaactac 286
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tgggaagattaaaactacgatccagattattatacccaccaaaactac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
