Query= MSMg01no273_o01.b1 MSMg01no273_o01.b1 CHROMAT_FILE:
MSMg01no273_o01.b1 PHD_FILE: MSMg01no273_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:20 2005
(318 letters)
>mm_chr2_75461905_75462618
Length = 714
Score = 551 bits (285), Expect = e-161
Identities = 306/315 (97%), Gaps = 4/315 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttgtttgggcacaagtcccttccacaaggtcaccaagattgcagtagctatct 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ggaattcttgtttaggcacaagtcccttccacaaggtcaccaagattgcagtagctatct 393
Query: 64 ttcctgtgtgcccctagaagaaaacacacacatcttctttcttttatcttaactgctccc 123
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 392 ttcctgtgtgcccatagaagaaaacacacatatcttctttcttttatcttaactgctccc 333
Query: 124 acccatcatcctcttcccatatttttgttcgcccgccctttttcttgtcacattttgtgc 183
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 332 acccatcatcctcttcccatatttttgtt----cgccctttttcttgtcacattttgtgc 277
Query: 184 cccatgtatcctttgcttgatagttaacctctcccaggtcagcagttgttaggaaaagta 243
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 276 cccatgtatcctttgcttgatagttaacctctcccaggtcagtagttgttaggaaaagta 217
Query: 244 ttgctcctgggagcaagaccaagttctcagcacaaaggaaatttatttgccccagaggga 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 216 ttgctcctgggagcaagaccaagttctcagcacaaaagaaatttatttgccccagaggga 157
Query: 304 cagaaggcaaggaat 318
|||||||||||||||
Sbjct: 156 cagaaggcaaggaat 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 714
Length adjustment: 9
Effective length of query: 309
Effective length of database: 705
Effective search space: 217845
Effective search space used: 217845
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_o01.g1 MSMg01no273_o01.g1 CHROMAT_FILE:
MSMg01no273_o01.g1 PHD_FILE: MSMg01no273_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:20 2005
(286 letters)
>mm_chr2_75358018_75358706
Length = 689
Score = 497 bits (257), Expect = e-145
Identities = 280/289 (96%), Gaps = 3/289 (1%)
Strand = Plus / Plus
Query: 1 agtctcctcttctgagctccgtaggtacccacatgcacttgcatatacacatgcacacac 60
|||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||
Sbjct: 201 agtctcctcttctgagctccgtgggtacccacatgcacttgtatatacacatgtgcacac 260
Query: 61 atagacatgcacacttaataacaagttttaaagtctaactttaaaaagcaccaaatcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagacatgcacacttaataacaagttttaaagtctaactttaaaaagcaccaaatcctg 320
Query: 121 aattccctagtcacatctcttattccctttgagacagaaatttactgaaggagaggaagc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattccctagtcacatctcttagtccctttgagacagaaatttactgaaggagaggaagc 380
Query: 181 cctctgggaagtaagtcttgaaatcattttagactta---agtagaacattcctttgaaa 237
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 381 cctctgggaagtaagtcttgaaatcattttagacttattaagtagaacattcttttgaaa 440
Query: 238 tagcaaaatggctttatcaagtgaagagctggacccacagtctgaaact 286
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagcaaaatggctttatcaagtgaagagctggacccacagtctgaaact 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 689
Length adjustment: 9
Effective length of query: 277
Effective length of database: 680
Effective search space: 188360
Effective search space used: 188360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
