Query= MSMg01no274_f20.b1 MSMg01no274_f20.b1 CHROMAT_FILE:
MSMg01no274_f20.b1 PHD_FILE: MSMg01no274_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:53 2005
(239 letters)
>mm_chr2_114594364_114595002
Length = 639
Score = 404 bits (209), Expect = e-117
Identities = 230/237 (97%), Gaps = 4/237 (1%)
Strand = Plus / Minus
Query: 1 tgcatctgcctttttcatttctgcataaaaatggtgaatctctctcctaactactaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgcatctgcctttttcatttctgcataaaaatggtgaatctctctcctaactactaaggt 313
Query: 61 ctgttgtctgttagcatgcccagaccttcccttacttgttgtgccaaggaacctggaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctgttgtctgttagcatgcccagaccttcccttacttgttgtgccaaggaacctggaatg 253
Query: 121 atcaagagatactaaaaacttaaagtctttataattttctgtgcaggttttcttatttat 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atcaagagatactaaaatcttaaagtctttataattttctgtgcaggttttcttatttat 193
Query: 181 ttatttatttatttatttatttatttatttatttatttat-ttatttattt-attta 235
|||||||||||||||||||||||||||| ||| ||||||| || ||| ||| |||||
Sbjct: 192 ttatttatttatttatttatttatttatctatctatttatgtt-ttt-tttcattta 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_f20.g1 MSMg01no274_f20.g1 CHROMAT_FILE:
MSMg01no274_f20.g1 PHD_FILE: MSMg01no274_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:53 2005
(242 letters)
>mm_chr2_114447200_114447846
Length = 647
Score = 412 bits (213), Expect = e-119
Identities = 238/250 (95%), Gaps = 11/250 (4%)
Strand = Plus / Plus
Query: 1 tgtttaa-atgctgtttagtgaaaattacagaatataggatgtaggtccctg----gcta 55
||||||| ||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 201 tgtttaacatgctgtttagtgaaaattacagaatataggatgtaggt---tgattggcta 257
Query: 56 tttattaaagaacctttagaa-tataataaattcaagctgaaatatttatcttctaaaaa 114
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tttattaaagaacctttagaagtataataaattcaagctgaaatatttatcttctaaaaa 317
Query: 115 tgttaaacatgatctctgcttttataatca-ttataaaattcacatatttagttctgttt 173
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 318 tgttaaacatgatctctgcttttataatcaattataaaattcacatatttagttctgttt 377
Query: 174 cacaatgatagacttggctatccactcagacaan-acaatcaaataccaaatacttaacc 232
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 378 cacaatgatagacttggctatccactcagacaagtacaatcaaataccaaatacttaacc 437
Query: 233 aaagggagaa 242
||||||||||
Sbjct: 438 aaagggagaa 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 647
Length adjustment: 9
Effective length of query: 233
Effective length of database: 638
Effective search space: 148654
Effective search space used: 148654
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
