Query= MSMg01no274_i17.b1 MSMg01no274_i17.b1 CHROMAT_FILE:
MSMg01no274_i17.b1 PHD_FILE: MSMg01no274_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:06 2005
(664 letters)
>mm_chr2_127743949_127745011
Length = 1063
Score = 1216 bits (629), Expect = 0.0
Identities = 653/661 (98%), Gaps = 1/661 (0%)
Strand = Plus / Minus
Query: 1 ggattcatgcccctggcctggaagcccacagaggcttctgagtatgtatccgatgtgtgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 860 ggattcatgcccctggcctggaagcccacagaggcttctgagtatgtatcagatctgtgt 801
Query: 61 gaggaagatccccttgttagtaagcagagaacccttggagacaaccctgtgagtctggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gaggaagatccccttgttagtaagcagagaacccttggagacaaccctgtgagtctggtg 741
Query: 121 atgtcatgcaatgagcaggtttaaggttagatgaaaaggtccctttataagaaggccact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atgtcatgcaatgagcaggtttaaggttagatgaaaaggtccctttataagaaggccact 681
Query: 181 aacaagagaggagatgagggattgcagggggtagaagatacacctgaaggtgtatctact 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aacaagagaggagatgagggattgcagggggtagaagatacacctgaaggtgtatctacc 621
Query: 241 ctgaatagtgcttgtcactctcaaggcagagccccaggcccatgctgagttctaccatga 300
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgaagagtgcttgtcactctcgaggcagagccccaggcccatgctgagttctaccatga 561
Query: 301 aataccaacaacataacccacagctctcaaaacactaagtaaaaacacatgatttggaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aataccaacaacataacccacagctctcaaaacactaagtaaaaacacatgatttggaca 501
Query: 361 ctccatgaagatctgcagtctgcccccttgagaataatattttgtaggggggttataaca 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 ctccatgaagatctgcagtctgcccccttgagaataatattttgtagggaggttataaca 441
Query: 421 aaaaaatgcaaccttctaaagatagcttgacttttaagattctaccatcagagttgaata 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaaaa-tgcaaccttctaaagatagcttgacttttaagattctaccatcagagttgaata 382
Query: 481 attcttggcaactcttttgtataaatctggtcagagccttactgtgaagtttgagaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcttggcaactcttttgtataaatctggtcagagccttactgtgaagtttgagaaaga 322
Query: 541 gacagataaagcagccagccagagacctggtgacagaaacaactattcttgaaaatggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacagataaagcagccagccagagacctggtgacagaaacaactattcttgaaaatggaa 262
Query: 601 agtagggcagaaagtcactttattttatttttacaaaatgtggagaatgacattcttcct 660
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtagggcggaaagtcactttattttatttttacaaaatgtggagaatgacattcttcct 202
Query: 661 c 661
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1063
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1053
Effective search space: 688662
Effective search space used: 688662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_i17.g1 MSMg01no274_i17.g1 CHROMAT_FILE:
MSMg01no274_i17.g1 PHD_FILE: MSMg01no274_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:06 2005
(632 letters)
>mm_chr2_127556339_127557370
Length = 1032
Score = 1137 bits (588), Expect = 0.0
Identities = 620/632 (98%), Gaps = 3/632 (0%)
Strand = Plus / Plus
Query: 1 cagggcctgtcctgggcaaggtgggaggagtagctggttcgctctgcctggtctggagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggcctgtcctgggcaaggtgggaggagtagctggttcgctctgcctggtctggagca 260
Query: 61 gccagcagagtttggatacatgaagcttaaagccaaggcattgcagggaaaggcaaagat 120
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gccagcagagtctggatacatgaagcttgaagccaaggcattgcagggaaaggcaaagat 320
Query: 121 cttcccagcaagcttccagacagcctgtcctcaaccttttccaagtcctagagcatatag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 cttcccagcaagcttccagacagcctgtcctcaaccttttccaagtcctagagcgtatag 380
Query: 181 ttcacaagctcaggcccccacactgctgacagaatggatccaaagtcacccaccttttct 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ttcacaagctcaggcccccacactgctgacagaatggatccaaagccacccaccttttct 440
Query: 241 gaatgtcacacacaagtgctatgtctctctttggggctgtggcccccttggatgtgacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatgtcacacacaagtgctatgtctctctttggggctgtggcccccttggatgtgacca 500
Query: 301 taatctacatggggtgtcagggaagatggggcagggtaagaagaggtacacacaggttcc 360
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 taatctacatggggcgtcagggaagatggggcagggtaaga---ggtacacacaggttcc 557
Query: 361 agggattgagcccagccaccaggcttgagggacagtgcctttacctgataagccatctca 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 558 agggattgagcccagccaccaggcttgagggacggtgcctttacctgataagccatctca 617
Query: 421 ctggcctagaaagtatcaattctgagtagactgtgacgttaactatgcacactgtacttc 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctggcctggaaagtatcaattctgagtagactgtgacgttaactatgcacactgtacttc 677
Query: 481 ctagagcagcttctaaacacgttctagtgacacagagacacagatcatcactggtgctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctagagcagcttctaaacacgttctagtgacacagagacacagatcatcactggtgctct 737
Query: 541 ttttggatgctagcctcactcctgattcactgagagatcccatctcaagggattatgtcc 600
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 738 ttttggatgctagcctcactcctgattcactgagagatcccgtctcaagggattatgtca 797
Query: 601 gagcatgatagagcacacatctgtatatacac 632
||||||||||||||||||||||||||||||||
Sbjct: 798 gagcatgatagagcacacatctgtatatacac 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
