Query= MSMg01no275_b08.b1 MSMg01no275_b08.b1 CHROMAT_FILE:
MSMg01no275_b08.b1 PHD_FILE: MSMg01no275_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:45 2005
(311 letters)
>mm_chr2_48325097_48325808
Length = 712
Score = 557 bits (288), Expect = e-163
Identities = 303/308 (98%), Gaps = 1/308 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacctcttctcttaaaaa-ctaacaatagtactaaagtagaaaagcctgccatg 62
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 204 ggaattcacctcttctcttaaaaaactaacaatagtactaaagtagaaaagccagccatg 263
Query: 63 ttgaatattgtctacatagttctaccactaggctgctgtagagactcttaacaaaagaca 122
|||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 264 ttgaatattgtctagatagttctaccaccgggctgctgtagagactcttaacaaaagaca 323
Query: 123 gtttgctcgattttgctacttaaaaaatatcagttactgctcatttactgatgatgtaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtttgctcgattttgctacttaaaaaatatcagttactgctcatttactgatgatgtaaa 383
Query: 183 tcaaagtcccggaagaaataatctatcattcctaacaaactgttttcaaaagatctttat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcaaagtcccggaagaaataatctatcattcctaacaaactgttttcaaaagatctttat 443
Query: 243 actcatccatcagtacccagaattacacaagctctgcctgagttgcaaatattttaaaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actcatccatcagtacccagaattacacaagctctgcctgagttgcaaatattttaaaag 503
Query: 303 cttgaagc 310
||||||||
Sbjct: 504 cttgaagc 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_b08.g1 MSMg01no275_b08.g1 CHROMAT_FILE:
MSMg01no275_b08.g1 PHD_FILE: MSMg01no275_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:45 2005
(282 letters)
>mm_chr2_48492684_48493364
Length = 681
Score = 511 bits (264), Expect = e-149
Identities = 273/276 (98%), Gaps = 1/276 (0%)
Strand = Plus / Minus
Query: 7 tgaatgcccgagtgcctctttttctctaatttgtagccacactctgaccttaattagaat 66
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 481 tgaatgcccgagtgcctctttttctctaatttgtagccagagtctgaccttaattagaat 422
Query: 67 gtccttgggattttataagacggtggaaatgtgctggtgagatttcagatcaatagctct 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtccttgggattttataagacggtggaaatgtgctggtgagatttcagatcaatagctct 362
Query: 127 tcctcagcactcacagattcagagcaagcagtagttcagacattagaaattgcaacccag 186
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 361 tcctcagcactcacagattcagagcaagcagtag-tcagacattagaaattgcaacccag 303
Query: 187 gcatgaaagcaccttggaaaaacacatattttatccccagtccccctgggatcagagtgt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcatgaaagcaccttggaaaaacacatattttatccccagtccccctgggatcagagtgt 243
Query: 247 cactggagccaataagttaaatcttaatatgtgaag 282
||||||||||||||||||||||||||||||||||||
Sbjct: 242 cactggagccaataagttaaatcttaatatgtgaag 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
