Query= MSMg01no275_i07.b1 MSMg01no275_i07.b1 CHROMAT_FILE:
MSMg01no275_i07.b1 PHD_FILE: MSMg01no275_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:16 2005
(692 letters)
>mm_chr2_21592892_21593983
Length = 1092
Score = 1323 bits (684), Expect = 0.0
Identities = 687/688 (99%)
Strand = Plus / Plus
Query: 5 gaattcttatgaatatggttggtacccttacaaaatcatcctcaaaatgacccctcaccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttatgaatatggttggtacccttacaaaatcatcctcaaaatgacccctcaccc 264
Query: 65 cttttgccatgtgaggttgaagatagaaggctatctacagttaggtaggtccaccaccag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttttgccatgtgaggttgaagatagaaggctatctacagttaggtaggtccaccaccag 324
Query: 125 aagcaatccttccagtgccttgatcttggaactgtgagaaataaacagtttaacagacat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagcaatccttccagtgccttgatcttggaactgtgagaaataaacagtttaacagacat 384
Query: 185 ccaacatttgacatttttgttatagcatctcagacaaacacaaaacaaatatgaccaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaacatttgacatttttgttatagcatctcagacaaacacaaaacaaatatgaccaatt 444
Query: 245 cagatgctgacccaactatgtatcatcctaatccaagaatgatcacatatatgtttctgt 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 cagatgctgacccaactatgtatcatcctaatccaagaatgatcacatatgtgtttctgt 504
Query: 305 aaccagtatctgcctctcagcatgttttccaacatgtgagaaagtgtggtggtggtgatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaccagtatctgcctctcagcatgttttccaacatgtgagaaagtgtggtggtggtgatc 564
Query: 365 ctgttgctgctggatggtcttgtccacttctcagtatgaccgtcaggcagcttgcacaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgttgctgctggatggtcttgtccacttctcagtatgaccgtcaggcagcttgcacaca 624
Query: 425 agggtatgaacagattaaattgcttatattgatttctctctaaacagttgtccatttgcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agggtatgaacagattaaattgcttatattgatttctctctaaacagttgtccatttgcc 684
Query: 485 cttggcatagcactatatcttatcacatatgataaaatcaaagatgatctgtgaaaagga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttggcatagcactatatcttatcacatatgataaaatcaaagatgatctgtgaaaagga 744
Query: 545 tgtcagataggcttgcttctatttgggaatgacttctattgtcattgacacaaaaaaggc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgtcagataggcttgcttctatttgggaatgacttctattgtcattgacacaaaaaaggc 804
Query: 605 tctgactcattagctctccatctccccatctacttataatgttattatacgtagcctttc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tctgactcattagctctccatctccccatctacttataatgttattatacgtagcctttc 864
Query: 665 ctacataagactcatttaaaactaatac 692
||||||||||||||||||||||||||||
Sbjct: 865 ctacataagactcatttaaaactaatac 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space: 737924
Effective search space used: 737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_i07.g1 MSMg01no275_i07.g1 CHROMAT_FILE:
MSMg01no275_i07.g1 PHD_FILE: MSMg01no275_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:16 2005
(662 letters)
>mm_chr2_21765169_21766231
Length = 1063
Score = 1185 bits (613), Expect = 0.0
Identities = 650/663 (98%), Gaps = 3/663 (0%)
Strand = Plus / Minus
Query: 1 ctgggatatgagtatttattcttcagtactaaatgctggaggaccaaaccatctcttaac 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 862 ctgggatatgagtatttattcttcagtactaaatgctggaggaccaaa-gatctcttaac 804
Query: 61 acatcacgccaatgcagtctttcacttggagtaattacatgggctagatttccaagaact 120
|| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 acttcatgccaatgtggtctttcacttggagtaattacatgggctagatttccaagaact 744
Query: 121 ctggcttgtggttgctgctgcattataattagtaatgcctgttcttattttaaaactctg 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ctggcttatggttgctgctgcattataattagtaatgcctgttcttattttaaaactctg 684
Query: 181 gttagtatattacaaaaatagttttcattta--tttttttacacttgatctagtttttat 238
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 683 gttagtatattacaaaaatagttttcatttaattttttttacacttgatctagtttttat 624
Query: 239 aattttccatgtctgctaattctctggctaagcaaccactcatcagttctctagattcac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aattttccatgtctgctaattctctggctaagcaaccactcatcagttctctagattcac 564
Query: 299 tgtatgttgatattttcaggcttctgtccttatttacttttccataatccttttcatata 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgtatgttgatattttcaggcttctgtccttatttacttttccataatccttttcatata 504
Query: 359 gttgaagagatttcttgggaacaactcaatttaactctttgcataaaaaaatgaggatga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gttgaagagatttcttgggaacaactcaatttaactctttgcataaaaaaatgaggatga 444
Query: 419 attggccttgtggcctaaattttttattttaccagttggagttgagaaatagttccactt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 443 attggccttgtggcctaaattttttattttaccagttggagttgagaaatagttctactt 384
Query: 479 cacagctctgtgcatttgagaatttctgggtcgttttcctctttctaatatttcttataa 538
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 383 cacagctctgtgcatttgagaatttctgggtcgttttcctccttctaatatttcttataa 324
Query: 539 accatacaattgttttctgagttcatttctttattgtagaatattgccaaattcatctaa 598
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 323 accatacaattgttttctgagttcatttctttattgtagaatcttgccaaattcatctaa 264
Query: 599 tcacttacagctcataattcctgacttttcttttaccagtttgtgttccaactcacaagt 658
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 263 tcacttacagctcataattcctgacttttctttcaccagtttgtgttccaactcacaagt 204
Query: 659 tca 661
|||
Sbjct: 203 tca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space: 686556
Effective search space used: 686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
