Query= MSMg01no275_i14.b1 MSMg01no275_i14.b1 CHROMAT_FILE:
MSMg01no275_i14.b1 PHD_FILE: MSMg01no275_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:17 2005
(610 letters)
>mm_chr2_134917629_134918635
Length = 1007
Score = 1067 bits (552), Expect = 0.0
Identities = 590/604 (97%), Gaps = 3/604 (0%)
Strand = Plus / Plus
Query: 7 attcactgagctctccaaaactaaggatttatgcttcttatcaaattcgagatgtttcag 66
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attcactgagctcttcaaaactaaggatttatgcttcttatcaaattcgagatgtttcag 266
Query: 67 tattatttctcagacatttgtaccttttctccatgctcaggggcttcccattggacttgg 126
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 267 tattatttctcagatatttgtaccttttctccatgttcaggggcttcccattggacttgg 326
Query: 127 ttagtggaagaagttggcttgttctgacatgtggtcttctcagcttagcttgttcactcc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttagtggaagaagttggcttgttctgacatgtggtcttctcagcttagcttgttcactcc 386
Query: 187 catatgtgatctgatcagcattggtaaaagagctctgtgcccatctgtgaagtactgtct 246
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 387 catatgtgatctgatcagcattggtaaaagagctctgtacccatctgtgaagtactgtct 446
Query: 247 tttccagtactttcttgtgaactcacccagtctcaatgttcctgggttgttgatagcacc 306
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 447 tttccagtactttcttgtgaactcacccagtctcagtgttcctgggttgttgatagcacc 506
Query: 307 tctctaacactagtataccctgggacacatttcatggctatccttgaacaatggactgct 366
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tctctaacactaggacaccctgggacacatttcatggctatccttgaacaatggactgct 566
Query: 367 tgcagtcccaagagaatgagtcggttcctatcaggtacttcttctgttgacttcaccaga 426
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 567 tgctgtcccaagagaatgagtcggttcctatcaggtacttct---gttgacttcaccaga 623
Query: 427 gagtcactgtcctgtgttgacagaaacaatttctgtaaaatgttctctcactatgagaca 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gagtcactgtcctgtgttgacagaaacaatttctgtaaaatgttctctcactatgagaca 683
Query: 487 tacatgctccatggtgtgtccaagacccatactcaaatactcacaaataaaatggaacaa 546
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tacatgctccatggcgtgtccaagacccatactcaaatactcacaaataaaatggaacaa 743
Query: 547 aatattttcaatggttttgtttttgagttgaggtttgaagatgggggagtactctagaag 606
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 744 aatattttcaatggttttgtttttgagttgcggtttgaaaatgggggagtactctagaag 803
Query: 607 gttc 610
||||
Sbjct: 804 gttc 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1007
Length adjustment: 10
Effective length of query: 600
Effective length of database: 997
Effective search space: 598200
Effective search space used: 598200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_i14.g1 MSMg01no275_i14.g1 CHROMAT_FILE:
MSMg01no275_i14.g1 PHD_FILE: MSMg01no275_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:17 2005
(200 letters)
>mm_chr2_135075804_135076402
Length = 599
Score = 348 bits (180), Expect = e-100
Identities = 195/200 (97%), Gaps = 1/200 (0%)
Strand = Plus / Minus
Query: 1 tattatgctcccattgaatgaaggaagtaggacattctggtggtacccaccaaaattctc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 399 tattatgctcccattgaatgaaggaggtaggacattctggtggtacccaccaaaattctc 340
Query: 61 caaatctagagaaacaagtcatatgttgttcattctcttctcatgttaataaaagagagg 120
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 339 caaatctagagaaacaagtcatatgttgttcattctcttcaaatgttaataaaagagagg 280
Query: 121 acacatggcagaggcagcagaggatgctctaagaagagcaattctttgctctgaatatag 180
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 279 acaca-ggcagaggcagcagaggatgctctaaaaagagcaattctttgctctgaatatag 221
Query: 181 ctgctagggttcaggccatc 200
||||||||||||||||||||
Sbjct: 220 ctgctagggttcaggccatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 599
Length adjustment: 8
Effective length of query: 192
Effective length of database: 591
Effective search space: 113472
Effective search space used: 113472
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
