Query= MSMg01no275_n05.b1 MSMg01no275_n05.b1 CHROMAT_FILE:
MSMg01no275_n05.b1 PHD_FILE: MSMg01no275_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:38 2005
(290 letters)
>mm_chr2_35548986_35549675
Length = 690
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%)
Strand = Plus / Plus
Query: 2 ctattttgaaaatgggaagagtaaaaacttttatcacaggtacagtatcctcaagacagg 61
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 202 ctattttgaaaatgggaagagtaaaaacttttatcacaggtacagcatcctcaagacagg 261
Query: 62 tagggacctaagaacctcagccttgctgggtaaggccagcataggcacacactattaaaa 121
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tagggacccaagaacctcagccttgctgggtaaggccagcataggcacacactattaaaa 321
Query: 122 agtaaagggttttagagcagacttcagcccctctggcttggggaggggtcagagcttgcc 181
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 322 agtaaagggttttagagcagacttcagcccctctggcttggggaagggtcagagcttgcc 381
Query: 182 tggtcctactgcagttatccaggaatcaccaggtttctgttgtcattttactttgattgt 241
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 382 tggtcctactgcagttatccaggaatcaccaggtttctgttgtcgttttactttgattgt 441
Query: 242 atttaatgcgtgtgagtgttttatcacatagtatgtgagtgaatgtctg 290
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atttaatgtgtgtgagtgttttatcacatagtatgtgagtgaatgtctg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no275_n05.g1 MSMg01no275_n05.g1 CHROMAT_FILE:
MSMg01no275_n05.g1 PHD_FILE: MSMg01no275_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:38 2005
(234 letters)
>mm_chr2_35720212_35720845
Length = 634
Score = 408 bits (211), Expect = e-118
Identities = 229/235 (97%), Gaps = 2/235 (0%)
Strand = Plus / Minus
Query: 1 aagcttgttggagatcctaaatgtgccgtgtcctctcacacctttggcaatgctctttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aagcttgttggagatcctaaatgtgccgtgtcctctcacacctttggcaatgctctttcc 318
Query: 61 tctatccatgatgctcctctgtttccactgagtggcctttcacctcccaaaactcagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tctatccatgatgctcctctgtttccactgagtggcctttcacctcccaaaactcagctt 258
Query: 121 gagcttgtctcctgaagccctctttgcctacctaggaaatagagcacacgcgtgctcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gagcttgtctcctgaagccctctttgcctacctaggaaatagagcacacgcgtgctcctt 198
Query: 181 gagggtttagagatatctaggagacaagcccctga-acatgtccggaaggggtgt 234
||||||||||||| | | ||||||||||||||||| | ||||||| |||||||||
Sbjct: 197 gagggtttagagacacccaggagacaagcccctgaga-atgtccgcaaggggtgt 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
