Query= MSMg01no275_p16.b1 MSMg01no275_p16.b1 CHROMAT_FILE:
MSMg01no275_p16.b1 PHD_FILE: MSMg01no275_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:49 2005
(683 letters)
>mm_chr2_76883700_76884783
Length = 1084
Score = 1292 bits (668), Expect = 0.0
Identities = 680/684 (99%), Gaps = 1/684 (0%)
Strand = Plus / Minus
Query: 1 ttctcactaccaaggcttctaaaaagaaagatcagagaacagtccgtggtgcgtggatgt 60
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 884 ttctcactaccaaggcttctgaaaagaaagatcagagaacagtccgtggtgtgtggatgt 825
Query: 61 aaatgtaaaatgaatggataatttaacaccttacttagactatgttacaacaagaatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 aaatgtaaaatgaatggataatttaacaccttacttagactatgttacaacaagaatttc 765
Query: 121 caggtactacactggagtaaaataaggactatgttcaataactagatagaaggcaaatta 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 764 caggtactacactggagtaaaataaggactatgttcaataactagacagaaggcaaatta 705
Query: 181 ttgatactaactcagccaaattc-aaaatcacttctaccctgctggtaactatcaacaca 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 704 ttgatactaactcagccaaattcaaaaatcacttctaccctgctggtaactatcaacaca 645
Query: 240 ccttatgatagcttaccttttctaggcattcctcagaccactgtacccttatgactgcag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ccttatgatagcttaccttttctaggcattcctcagaccactgtacccttatgactgcag 585
Query: 300 ttgacattggtaaaaaaacaattcccagcttatgctgcattaaagaatatttcatatttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ttgacattggtaaaaaaacaattcccagcttatgctgcattaaagaatatttcatatttt 525
Query: 360 aacagcttcttaataatataaaaggtaccacaactttatttataacatacataaaattat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aacagcttcttaataatataaaaggtaccacaactttatttataacatacataaaattat 465
Query: 420 ccggtagagttactcccactgtggtctaatgtctttaataatttgttaaatttaataatc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ccggtagagttactcccactgtggtctaatgtctttaataatttgttaaatttaataatc 405
Query: 480 acaattacagaatatataagtttattattcaattttcccctaaaaccactaaaatactac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 acaattacagaatatataagtttattattcaattttcccctaaaaccactaaaatactac 345
Query: 540 tgaggcccttaaagactctgcacctgatgtctccacagagactgtaggtctaagcacttg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tgaggcccttaaagactctgcacctgatgtctccacagagactgtaggtctaagcacttg 285
Query: 600 attgtgtctctgtacacagctcaggcttgtctgtatcctgcttgggtatgatgaagtact 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 attgtgtctctgtacacagctcaggcttgtctgtatcctgcttgggtatgatgaagtact 225
Query: 660 tgccacctaaaagagctgaatgca 683
||||||||||||||||||||||||
Sbjct: 224 tgccacctaaaagagctgaatgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space: 722802
Effective search space used: 722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_p16.g1 MSMg01no275_p16.g1 CHROMAT_FILE:
MSMg01no275_p16.g1 PHD_FILE: MSMg01no275_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:49 2005
(311 letters)
>mm_chr2_76729214_76729924
Length = 711
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%)
Strand = Plus / Plus
Query: 1 tctgaacctggaatgtgtaggtgcctgcatcttccttttcaactgagaggatttttaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaacctggaatgtgtaggtgcctgcatcttccttttcaactgagaggatttttaagg 260
Query: 61 aagagattttgttgtagaagctaaatttgtgtttttggctgctggtcaagagctttccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagagattttgttgtagaagctaaatttgtgtttttggctgctggtcaagagctttccgt 320
Query: 121 ccttataccattcaacagagagctccggagtgccagccaccttacactccagggcacacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttataccattcaacagagagctccggagtgccagccaccttacactccagggcacacg 380
Query: 181 tttctcccacagtcaccgtcatggaccctgccttctctacaatgaccgcaggctctgaaa 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tttctcccacagtcaccgtcatggaccctgccttctctataatgaccgcaggctctgaaa 440
Query: 241 taaaacacgacatgcatctttgaaaacctagacctttctttccctgcttctcctctatga 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaacacgacatggatctttgaaaacctagacctttctttccctgcttctcctctatga 500
Query: 301 attgcactaag 311
|||||||||||
Sbjct: 501 attgcactaag 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
