Query= MSMg01no276_g18.b1 MSMg01no276_g18.b1 CHROMAT_FILE:
MSMg01no276_g18.b1 PHD_FILE: MSMg01no276_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:21 2005
(349 letters)
>mm_chr2_127637367_127638115
Length = 749
Score = 654 bits (338), Expect = 0.0
Identities = 347/350 (99%), Gaps = 1/350 (0%)
Strand = Plus / Plus
Query: 1 ctgcttcttctcgatagcgtcagtagtcatccatgaaccctgcctataacagttactatc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 200 ctgcttcttctcgatagcgtcagtagtcatccatgaaccctgcctatagcagttactatc 259
Query: 61 tta-gtgttctaatggtgaccttctacattccttggaatgcttctgtaagggagatctga 119
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttaagtgttctaatggtgaccttctacattccttggaatgcttctgtaagggagatctga 319
Query: 120 cccctctcccctattgtatgaatatgggtattcattttatttcttgggttaaaatacaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cccctctcccctattgtatgaatatgggtattcattttatttcttgggttaaaatacaat 379
Query: 180 attacttattctttcaaattgttccaggtctgactcctgacttattcaagatggttcttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attacttattctttcaaattgttccaggtctgactcctgacttattcaagatggttcttg 439
Query: 240 tgccctcccccctttataaaaagacaaaaccaaaataatcacatccataattgctggcat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgccctcccccctttataaaaagacaaaaccaaaataatcacatccataattgctggcat 499
Query: 300 agggacatctattttcactgacatggcctgtaaaatcagacatttcttta 349
|||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agggtcatctattttcactgacatggcctgtaaaatcagacatttcttta 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_g18.g1 MSMg01no276_g18.g1 CHROMAT_FILE:
MSMg01no276_g18.g1 PHD_FILE: MSMg01no276_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:21 2005
(285 letters)
>mm_chr2_127775969_127776653
Length = 685
Score = 532 bits (275), Expect = e-155
Identities = 281/283 (99%)
Strand = Plus / Minus
Query: 1 aaggacacacatagctgcagttcctcggctgccaagctctgtcctccctgctagtctgtt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 387 aaggacacacatagctgcagttcctcggctgccaagctctgtcctctctgctagtctgtt 328
Query: 61 ctctgagttctcgtccagatcactgatgttttcctcggttctcattgtgtgttttcaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctctgagttctcgtccagatcactgatgttttcctcggttctcattgtgtgttttcaagg 268
Query: 121 acacccatgggacttatattgaaagtgtaaatgacttttctgcttctctgtgaggaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acacccatgggacttatattgaaagtgtaaatgacttttctgcttctctgtgaggaggtc 208
Query: 181 ctatgctgcatgcctgtggatgtcaaaggacaacttgtgggaactcagtttgtctctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ctatgctgcatgcctgtggatgtcaaaggacaacttgtgggaactcagtttgtctctttc 148
Query: 241 caccacgagggtcctggggatccaactctggctgtcaggcgta 283
|||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 147 caccacgagggtcctgaggatccaactctggctgtcaggcgta 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
