Query= MSMg01no276_l18.b1 MSMg01no276_l18.b1 CHROMAT_FILE:
MSMg01no276_l18.b1 PHD_FILE: MSMg01no276_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:44 2005
(294 letters)
>mm_chr2_17786555_17787248
Length = 694
Score = 495 bits (256), Expect = e-144
Identities = 289/312 (92%), Gaps = 20/312 (6%)
Strand = Plus / Minus
Query: 1 gatggttgtgagccaccatgtggttgctgggatttgaactcaggaactctggaagagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gatggttgtgagccaccatgtggttgctgggatttgaactcaggaactctggaagagcag 440
Query: 61 ttagtgctcttaactgctgagccatctctccagcccctgtgtctacttttcttaattatt 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 439 ttagtgctcttaactgctgagccatctctccagcccctgtgtctatttttcttaattatt 380
Query: 121 attaatgattgtgctaatgaagttaccatttggatgtacagtggcctgtggaagcccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attaatgattgtgctaatgaagttaccatttggatgtacagtggcctgtggaagcccaga 320
Query: 181 tagactactctttcctttctgtgt------------------atacacacacacacacac 222
||||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 319 tagactactctttcctttc--tgtacacacacacacacacacacacacacacacacacac 262
Query: 223 acacacacatatatatatatatattgccctcagtgaattttcgtgaagctctgtggggta 282
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacacacacatatatatatatattgccctcagtgaattttcgtgaagctctgtggggta 202
Query: 283 tgcaagccacta 294
||||||||||||
Sbjct: 201 tgcaagccacta 190
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no276_l18.g1 MSMg01no276_l18.g1 CHROMAT_FILE:
MSMg01no276_l18.g1 PHD_FILE: MSMg01no276_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:44 2005
(286 letters)
>mm_chr2_17620218_17620902
Length = 685
Score = 507 bits (262), Expect = e-148
Identities = 280/286 (97%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1 cctattttggtgtcctgatgcacagagagctggcttaaaacaggtctaccccttctctga 60
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 201 cctattttggtgtcctgatgcacagagagctggcttaaaacaggcctagcccttctctga 260
Query: 61 gaccaggatcagacagggcaggccaatagcccaacaactcttctggcttcaccccccccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 gaccaggatcagacagggcaggccaatagcccaacaactcttctggcttca-cccccccc 319
Query: 121 cacctcccgttatttcagaatcaactgttaggatgacctgaggtaccctgtgactataac 180
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 cacctcccattatttcagaatcatctgttaggatgacctgaggtaccctgtgactataac 379
Query: 181 catacaaaccctagaagcacatgactacatacagtgatctatgttagactatgtaaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 catacaaaccctagaagcacatgactacatacagtgatctatgttagactatgtaaactt 439
Query: 241 gaactgattatacagagctgaagttgagtctttgcatatatgtgtg 286
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 gaactgattaaacagagctgaagttgagtctttgcatatatgtgtg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
