Query= MSMg01no277_g01.b1 MSMg01no277_g01.b1 CHROMAT_FILE:
MSMg01no277_g01.b1 PHD_FILE: MSMg01no277_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:30 2005
(194 letters)
>mm_chr2_18859809_18860403
Length = 595
Score = 337 bits (174), Expect = 4e-97
Identities = 189/194 (97%), Gaps = 1/194 (0%)
Strand = Plus / Minus
Query: 1 acacatttaaa-tttttttttcttaacttgtgtatcataaaatggaatctttttgaggag 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acacatttaaattttttttttcttaacttgtgtatcataaaatggaatctttttgaggag 335
Query: 60 aagggaaacaaacactagataaccccctggatcatgtgatgtgactgtggagaggggcca 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagggaaacaaatactagataaccccctggatcatgtgatgtgactgtggagaggggcca 275
Query: 120 acaggaatagtaggcctggccacagttttccaggaaggctttgaggatgaagggaatcca 179
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 acaggaagagcaggcctggccacagttttccaggaaggctttgaggatgaagggaatccg 215
Query: 180 atctcagcagtcct 193
||||||||||||||
Sbjct: 214 atctcagcagtcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 595
Length adjustment: 8
Effective length of query: 186
Effective length of database: 587
Effective search space: 109182
Effective search space used: 109182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_g01.g1 MSMg01no277_g01.g1 CHROMAT_FILE:
MSMg01no277_g01.g1 PHD_FILE: MSMg01no277_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:30 2005
(292 letters)
>mm_chr2_18722749_18723441
Length = 693
Score = 528 bits (273), Expect = e-154
Identities = 283/289 (97%), Gaps = 6/289 (2%)
Strand = Plus / Plus
Query: 1 cccagcaaatgactcgacgacatctgactcaagggaagggt-tcttcatcccctcaccgg 59
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 206 cccagcaaatgac-----gacatctgactcaagggaagggtctcttcatcccctcaccgg 260
Query: 60 gaaagcagcccacaccgctccactgtggcaggcaggctcccttgggattacttgatcggg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagcagcccacaccgctccactgtggcaggcaggctcccttgggattacttgatcggg 320
Query: 120 ctgcactgggacaccacccttgtccctacctgcgcagcccgctccttgccagggctcttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgcactgggacaccacccttgtccctacctgcgcagcccgctccttgccagggctcttc 380
Query: 180 ctggtgcatctagaattcggtgtcaagaaagctccaagcctggagctgagggctctgagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggtgcatctagaattcggtgtcaagaaagctccaagcctggagctgagggctctgagc 440
Query: 240 tttcttccctgggtcgcaggtgggaggagagagaggtcgtggtagcttg 288
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcttccctgggtcgcaggtgggaggagagagaggtcgtggtagcttg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
