Query= MSMg01no278_k01.b1 MSMg01no278_k01.b1 CHROMAT_FILE:
MSMg01no278_k01.b1 PHD_FILE: MSMg01no278_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:00 2005
(618 letters)
>mm_chr2_76889112_76890129
Length = 1018
Score = 1122 bits (580), Expect = 0.0
Identities = 607/616 (98%), Gaps = 2/616 (0%)
Strand = Plus / Plus
Query: 4 ggaattcataagttatcaca-gccatggaaacacagtatgagatttcaggcaatcgtcac 62
||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcataagtta-caaaagccatggaaacacagtatgagatttcaggcaatcgtcac 262
Query: 63 catactttaatagtcaccatactttgaaggtttcaagatcattcttagttgaaatgaact 122
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 263 catactttaatagtcaccatactttgaaggtttcaagatcattcttagttggaatgaact 322
Query: 123 aaagccagcctgcactagctcccagggccagagtctctttcctgatcccaatattctact 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaagccagcctgcactagctcccagggccagagtctctttcctgatcccaatattctact 382
Query: 183 tattcagttgatgcctgtttcctaagctcataccatcttttccttaattttcttcttcta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tattcagttgatgcctgtttcctaagctcataccatcttttccttaattttcttcttcta 442
Query: 243 tttatctttagtgaaccacacagaaggatgccctttccatggaagattctaagatcccct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tttatctttagtgaaccacacagaaggatgccctttccatggaagattctaagatcccct 502
Query: 303 actaagatttgtttacttccttagagaccaaagtgagttcttcgagaaaaaggccagtga 362
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 503 actaagatttgtttacttccttagagaccaaagtgagttctgcgagaaaaaggccagtga 562
Query: 363 gacatgtctgtgtacacataagcaaacaatgtcatagggacaaaggagggataacaacag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gacatgtctgtgtacacataagcaaacaatgtcatagggacaaaggagggataacaacag 622
Query: 423 ctctacacggagtaagtacagaagaactttccagcaggtgacatttggtctgtcccttgc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctctacacggagtaagtacagaagaactttccagcaggtgacatttggtctgtcccttgc 682
Query: 483 tggggtgagagtgagaggaggtcttggatgggaggcactgctgcaaaagcaaagtgtggc 542
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tggggtgagagtgagagaaggtcttggatgggaggcactgctgcaaaagcaaagtgtggc 742
Query: 543 accactgtcatcagggaaaatgcatgctgtcacatgaatgaaattcagattcttcagctg 602
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 743 gccactgtcatcagggaaaatgcatgctgtcgcgtgaatgaaattcagattcttcagctg 802
Query: 603 actggcaagaagtccg 618
||||||||||||||||
Sbjct: 803 actggcaagaagtccg 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_k01.g1 MSMg01no278_k01.g1 CHROMAT_FILE:
MSMg01no278_k01.g1 PHD_FILE: MSMg01no278_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:00 2005
(287 letters)
>mm_chr2_77037118_77037804
Length = 687
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%)
Strand = Plus / Minus
Query: 1 aggagttggtgttggtagatgtctacatggtggaaatgctgtgaagccaaagccaagcct 60
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 485 aggagttggtgttggtagatgtctacatggtggaaatgatgtgaagagaaagccaagcct 426
Query: 61 ttgtggcatccctctgtggataggggacctgagaaggcgacattcaaattctgcagatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttgtggcatccctctgtggataggggacctgagaaggcgacattcaaattctgcagatgc 366
Query: 121 gctgaggcagtgctgaggtttggggacaacaacagtctggagggaatgatgaggcatgag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 actgaggcagtgctgaggtttggggacaacaacagtctggagggaatgatgaggcatgag 306
Query: 181 ctcacccaggtcttgtgggatgttcttgataagaactacagttggtttgggaaaactcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctcacccaggtcttgtgggatgttcttgataagaactacagttggtttgggaaaactcca 246
Query: 241 agggtccccgtattttctgagtgcaaacaggcttcccttagagca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agggtccccgtattttctgagtgcaaacaggcttcccttagagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
