Query= MSMg01no279_g05.b1 MSMg01no279_g05.b1 CHROMAT_FILE:
MSMg01no279_g05.b1 PHD_FILE: MSMg01no279_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:58 2005
(695 letters)
>mm_chr2_9077437_9078531
Length = 1095
Score = 1297 bits (671), Expect = 0.0
Identities = 686/691 (99%)
Strand = Plus / Plus
Query: 5 gaattcccattcttccatcttccttctgacatttacatgcagatttcaatttaggcgtga 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattcccattctttcatcttccttctgacatttacatgcagatttcaatttaggcatga 264
Query: 65 tcaataaatctacatctactttcatgtagtaattgtttcttttgatatgatctgttttat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaataaatctacatctactttcatgtagtaattgtttcttttgatatgatctgttttat 324
Query: 125 gtaaaaatgaagcaaaagacacaactttgttgaggcacagccatttgtaaagcaatttgc 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaaaaatgaagcaagagacacaactttgttgaggcacagccatttgtaaagcaatttgc 384
Query: 185 ttcccaaacctacaaatatgaaacagtagtcttcctttaccatccttgatttttacgtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcccaaacctacaaatatgaaacagtagtcttcctttaccatccttgatttttacgtta 444
Query: 245 ttttataaaaaaaaaattttttttaaatccagggactctaagttgtccagtcaaaaactt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttataaaaaaaaaattttttttaaatccagggactctaagttgtccagtcaaaaactt 504
Query: 305 gtgctctaatgttggatggagctgtgttaaaaacaaatactaagagttctgagttcactg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgctctaatgttggatggagctgtgttaaaaacaaatactaagagttctgagttcactg 564
Query: 365 aagtgaaggtgtagatgtaatattgctttaaaaaacacatatagcctcagtgtatactaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagtgaaggtgtagatgtaatattgctttaaaaaacacatatagcctcagtgtatactaa 624
Query: 425 tccataggactatagcctttgtgtatccctaggtctcccatgactcttcactataacaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccataggactatagcctttgtgtatccctaggtctcccatgactcttcactataacaat 684
Query: 485 tccatctttctacataaatccacaaatattattctatcagtgttgggaaagatataatgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tccatctttctacataaatccacaaatattattctatcagtgttgggaaagatataatgt 744
Query: 545 ttcacaaaatacatggttcagcttgctccattcatcttattcactacaaattcacactat 604
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 745 ttcacaaaatacatggttcagcttgctccattcatcttattaactacaaattcacactat 804
Query: 605 cttcttcttaatgttaggaaaaactggtaaaagagaagctgagtttctaagacagggaaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 805 cttcttcttaatgttaggaaaaactggtaaaagagaagctgagtttctaagacagtgaaa 864
Query: 665 atgcactcatacccaaagagctctatgtaaa 695
|||||||||||||||||||||||||||||||
Sbjct: 865 atgcactcatacccaaagagctctatgtaaa 895
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_g05.g1 MSMg01no279_g05.g1 CHROMAT_FILE:
MSMg01no279_g05.g1 PHD_FILE: MSMg01no279_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:58 2005
(669 letters)
>mm_chr2_9227376_9228444
Length = 1069
Score = 1270 bits (657), Expect = 0.0
Identities = 666/669 (99%)
Strand = Plus / Minus
Query: 1 acttagctataatgtgcatatatatattctttggtataattatgtatgtatgccacagtt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1019 acttagctataatgtgcatatatatattctttggtataattatgtatatatgccacagtt 960
Query: 61 agccatttatagaattaattatgcataattttgtagatttaaccacatacaaacataata 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 agccatttatagaattaactatgcataattttgtagatttaaccacatacaaacataata 900
Query: 121 tttaaaagtcttattaatattaaatatttacataaatctctgtattcattaatattaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 tttaaaagtcttattaatattaaatatttacataaatctctgtattcattaatattaaag 840
Query: 181 tgactacaaaggcaaacagtggatatgttgttttccgtttagcctttgttgtatttcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 tgactacaaaggcaaacagtggatatgttgttttccgtttagcctttgttgtatttcaag 780
Query: 241 gagatatatttaaaagatttgtttaatttaaaataccctagtaaagttacttattaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gagatatatttaaaagatttgtttaatttaaaataccctagtaaagttacttattaaaat 720
Query: 301 atagtacattggtttgtttgataaagaatgatgcaatttaaagaaatactagctcattat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 719 atagtacattggtttgtttgataaagaatgatgcaatttaaagaaatactagctcactat 660
Query: 361 gtcctaatgacaaccataattagaaatgtctgtctctgaatttcacaagaatagaagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gtcctaatgacaaccataattagaaatgtctgtctctgaatttcacaagaatagaagaaa 600
Query: 421 agttgttgttcagccagagccaaaagcatactccccaccgcatctgagtaatttaaaccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agttgttgttcagccagagccaaaagcatactccccaccgcatctgagtaatttaaaccc 540
Query: 481 aggctgagttgggaaaaggacaggtgtaattggcctagtctctgctacttccagccttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aggctgagttgggaaaaggacaggtgtaattggcctagtctctgctacttccagccttac 480
Query: 541 aattaccataataaggttgtctatagagaggtcagaagctaacggccagtttggctgcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aattaccataataaggttgtctatagagaggtcagaagctaacggccagtttggctgcat 420
Query: 601 ccttctaagactgtcatcagctaaagaacaaggagtccattcggtcaggaggaaaagcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ccttctaagactgtcatcagctaaagaacaaggagtccattcggtcaggaggaaaagcta 360
Query: 661 aatagttat 669
|||||||||
Sbjct: 359 aatagttat 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
