Query= MSMg01no280_n09.b1 MSMg01no280_n09.b1 CHROMAT_FILE:
MSMg01no280_n09.b1 PHD_FILE: MSMg01no280_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:46 2005
(211 letters)
>mm_chr2_130205363_130205972
Length = 610
Score = 296 bits (153), Expect = 7e-85
Identities = 196/213 (92%), Gaps = 8/213 (3%)
Strand = Plus / Plus
Query: 1 gtcccttaacccctacttggtattggcatag----taaataaacaaacaaacaaacaaat 56
||||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||
Sbjct: 198 gtcccttaacccctacttggtattggcatagtaaataaataaataaataaataaacaaat 257
Query: 57 aaataaataaatacaaacacaaataaata-aaataaatatgcttaataatagaagaaaga 115
|||||||||||| ||| ||||| ||| | |||||||||||||||||| |||||||||||
Sbjct: 258 aaataaataaat--aaatacaaacaaacacaaataaatatgcttaatagtagaagaaaga 315
Query: 116 aaatgatagccactttcatataacgtaataatctgtaaggaaattctttctttataaagc 175
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 316 aaatgatagccactttcatataacgtaataatctgtaaggaaat-ctttctttaaaaagc 374
Query: 176 tttgggggaagtgaaaacacgatccagtgattt 208
|||||||||||||||||||| ||||||||||||
Sbjct: 375 tttgggggaagtgaaaacacaatccagtgattt 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 610
Length adjustment: 9
Effective length of query: 202
Effective length of database: 601
Effective search space: 121402
Effective search space used: 121402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no280_n09.g1 MSMg01no280_n09.g1 CHROMAT_FILE:
MSMg01no280_n09.g1 PHD_FILE: MSMg01no280_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:46 2005
(151 letters)
>mm_chr2_130351505_130352055
Length = 551
Score = 230 bits (119), Expect = 3e-65
Identities = 143/151 (94%)
Strand = Plus / Minus
Query: 1 aaaggcaactccttcctcccaagtgcagtagtgcacccacccaagcatccccacagccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 300 aaaggcaactccttcctcccaagtgcagtagtgcacccacccaagcatcatcacagccaa 241
Query: 61 tcagctttattcctcagattaaactcactaccacttacgaagaagaaggaggaggaggag 120
| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 240 ttagctttattcctcagattaaactcactaccacctacgaagaagaaggaggaggaagag 181
Query: 121 gaggaggaggaggaggaggaggagaaggagg 151
||||| |||||||||||| ||||| ||||||
Sbjct: 180 gaggacgaggaggaggagaaggaggaggagg 150
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
