Query= MSMg01no288_m05.b1 MSMg01no288_m05.b1 CHROMAT_FILE:
MSMg01no288_m05.b1 PHD_FILE: MSMg01no288_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:55 2005
(249 letters)
>mm_chr2_78807510_78808157
Length = 648
Score = 443 bits (229), Expect = e-129
Identities = 244/249 (97%), Gaps = 1/249 (0%)
Strand = Plus / Plus
Query: 1 agtcagtttcttcacaacttccctggattgtggcagtagtttaagtatctcgccggctct 60
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 201 agtcagtttcttcacaacttccctggattgtggcagtagtttaagtatct-gacggctct 259
Query: 61 gtaatgcttgtttgtggagatacacagctaaaggaaacaaaatcagtgcttcagagacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtaatgcttgtttgtggagatacacagctaaaggaaacaaaatcagtgcttcagagacat 319
Query: 121 gtctgcaacacagtttccactgcagttctgtttacagtttgtatctagcagttgatgagt 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 320 atctgcaacacagtttccactgcagttctgtttacagtttgtatctatcagttgatgaat 379
Query: 181 ggatagagacaatgtggaattcttgcagtggaatactattcagtcattagaataggtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggatagagacaatgtggaattcttgcagtggaatactattcagtcattagaataggtaaa 439
Query: 241 attttatca 249
|||||||||
Sbjct: 440 attttatca 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 648
Length adjustment: 9
Effective length of query: 240
Effective length of database: 639
Effective search space: 153360
Effective search space used: 153360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no288_m05.g1 MSMg01no288_m05.g1 CHROMAT_FILE:
MSMg01no288_m05.g1 PHD_FILE: MSMg01no288_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:55 2005
(285 letters)
>mm_chr2_78926149_78926833
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Minus
Query: 1 cacacctgttcattctcttcttggtctttggcccacattaaaatcatttctttttggaaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 416 cacacctgttcattctcttcttggtctttgacccacattaaaatcatttctttttggaaa 357
Query: 61 cccatgaaaggaggaaaataaattcactttcttttttgatttctgggcatgtcgactcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cccatgaaaggaggaaaataaattcactttcttttttgatttctgggcatgtcgactcta 297
Query: 121 actgcatttacgacaatctttgtgttggtgcctggattactatgcttgcttgttgtctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 actgcatttacgacaatctttgtgttggtgcctggattactatgcttgcttgttgtctgc 237
Query: 181 accatgcctacactaatgaataagatcctgggctgtagccaggcatggtggtgcatgcct 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 accatgtctacactaatgaataagatcctgggctgtagccaggcatggtggtgcatgcct 177
Query: 241 ttaatcctatcactcatgaggcagaggcaggcagatttctgagtt 285
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 176 ttaatcctagcactcatgaggcagaggcaggcagatttctgagtt 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
