Query= MSMg01no288_o04.b1 MSMg01no288_o04.b1 CHROMAT_FILE:
MSMg01no288_o04.b1 PHD_FILE: MSMg01no288_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:05 2005
(319 letters)
>mm_chr2_70121637_70122355
Length = 719
Score = 596 bits (308), Expect = e-175
Identities = 314/316 (99%)
Strand = Plus / Plus
Query: 4 ggaattcaaaagcatgaaagacaacaccagtaaataaacaaacaacaccacacaggcaag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 204 ggaattcaaaagcatgaaagacaacaccagtaaataaacaaacaacaccacaccggcaag 263
Query: 64 cacagggcccacacctctaatcccagccccaaagccacagacacaggaccagtctgcatt 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacagggcccacacctgtaatcccagccccaaagccacagacacaggaccagtctgcatt 323
Query: 124 caagactagcctgtgctagtgaaacttccttaaaaaacaaagcaaaaccagaaaagttat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caagactagcctgtgctagtgaaacttccttaaaaaacaaagcaaaaccagaaaagttat 383
Query: 184 catttgggctccgtttcatctaaggggacacagggcactggatgaagctgggctttgtag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catttgggctccgtttcatctaaggggacacagggcactggatgaagctgggctttgtag 443
Query: 244 gatataaaatgattactgtgtgtttgtcaactgtcataaagtttctggtttagagcccca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gatataaaatgattactgtgtgtttgtcaactgtcataaagtttctggtttagagcccca 503
Query: 304 tttcaaaagacagact 319
||||||||||||||||
Sbjct: 504 tttcaaaagacagact 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_o04.g1 MSMg01no288_o04.g1 CHROMAT_FILE:
MSMg01no288_o04.g1 PHD_FILE: MSMg01no288_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:05 2005
(289 letters)
>mm_chr2_70278717_70279405
Length = 689
Score = 505 bits (261), Expect = e-147
Identities = 282/289 (97%), Gaps = 3/289 (1%)
Strand = Plus / Minus
Query: 1 taattcaacaaagatcttcctatttgttgaaggctttttctcttttgttcacaaacccta 60
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 415 taattcaacaaagatcttcctatttgtcgaaggctttttctcttttgtttacaaacccta 356
Query: 61 accacgaggtcatcagcttcagcctggatcctttagcctcatgacgcttagggaacatgt 120
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 355 accacaaggtcatcagcttcagcctggatcctttagcctcctgacgcttagggaacatgt 296
Query: 121 ctgtattatttgggaaaagccagataatgagtagaaggaaagagaggacagtcatgcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ctgtattatttgggaaaagccagataatgagtagaaggaaagagaggacagtcatgcagg 236
Query: 181 agacgggtgggcttctgcatcttttggagtcttttttttttaattaggtattttcttcat 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 235 agacgggtgggcttctgcatcttttggagtc-tttttttttaattaggtattttcttcat 177
Query: 241 ttacatttccagtgctatctcaaaagtcccacataccc-ccccctcccc 288
|||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 176 ttacatttccagtgctatctcaaaagtcccacataccctccccc-cccc 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
