Query= MSMg01no289_k06.b1 MSMg01no289_k06.b1 CHROMAT_FILE:
MSMg01no289_k06.b1 PHD_FILE: MSMg01no289_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:59 2005
(319 letters)
>mm_chr2_3346552_3347270
Length = 719
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%)
Strand = Plus / Plus
Query: 5 gaattcatcatgaattagaatagtgtctgaggtgtgactcagcagtttaggaggtagcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcatgaattagaatagtgtctgaggtgtgactcagcagtttaggaggtagcag 264
Query: 65 gttttcgatacttgttcctcaagagtgtgatttgggtcttaatttactctcgggacttaa 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 gttttcgatacttgttcctcaagagtgtgatttaggtcttaatttactctcgggacttaa 324
Query: 125 agtacaaacaagatgtgcttgattatagtttttaaatcacaggttaactcaggaagaaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtacaaacaagatgtgcttgattatagtttttaaatcacaggttaactcaggaagaaga 384
Query: 185 aacatattttaaaggttataataaaaagggtcggagctgagagatggttcaatggtcaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacatattttaaaggttataataaaaagggtcggagctgagagatggttcaatggtcaag 444
Query: 245 agcacttgatgctctcccagaggacctgtgtttgggtaccagcacccacgttaggcatct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agcacttgatgctctcccagaggacctgtgtttgggtaccagcacccacgttaggcatct 504
Query: 305 cacaaccccctgtaa 319
|||||||||||||||
Sbjct: 505 cacaaccccctgtaa 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_k06.g1 MSMg01no289_k06.g1 CHROMAT_FILE:
MSMg01no289_k06.g1 PHD_FILE: MSMg01no289_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:00 2005
(293 letters)
>mm_chr2_3534878_3535569
Length = 692
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 catgtcagagtcagacacgcaggattcagatttcatgaacataaacacaaccccacgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 catgtcagagtcagacacgcaggattcagatttcatgaacataaacacaaccccacgggg 431
Query: 61 gaagagaagtggcagctgagggccagatgccctcgggggaagccatgtgtttataaactc 120
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaagagaagcggcacctgagggccagatgccctcgggggaagccatgtgtttataaactc 371
Query: 121 tcgagcctgcaggaactgttgaggccctcaactcccccaccccagtctctcatccatctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcgagcctgcaggaactgttgaggccctcaactcccccaccccagtctctcatccatctc 311
Query: 181 acggcagagccaggttaacgaggatggtttgagaagcttggctggtttcagaaaaactag 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 310 acggcagagccaggttaacgaggatggtttgag-agcttggctggtttcagaaaaactag 252
Query: 241 actctacttgcaatcagagacacagggagtcatatcggaggggaacagaag 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 actctacttgcaatcagagacacagggagtcatatcggaggggaacagaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
