Query= MSMg01no289_k11.b1 MSMg01no289_k11.b1 CHROMAT_FILE:
MSMg01no289_k11.b1 PHD_FILE: MSMg01no289_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:00 2005
(247 letters)
>mm_chr2_75358088_75358737
Length = 650
Score = 453 bits (234), Expect = e-132
Identities = 245/250 (98%), Gaps = 3/250 (1%)
Strand = Plus / Plus
Query: 1 acacttaataacaagttttaaagtctaactttaaaaagcaccaaatcctgaattccctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacttaataacaagttttaaagtctaactttaaaaagcaccaaatcctgaattccctag 260
Query: 61 tcacatctcttattccctttgagacagaaatttactgaaggagaggaagccctctgggaa 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacatctcttagtccctttgagacagaaatttactgaaggagaggaagccctctgggaa 320
Query: 121 gtaagtcttgaaatcattttagactta---agtagaacattcctttgaaatagcaaaatg 177
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 321 gtaagtcttgaaatcattttagacttattaagtagaacattcttttgaaatagcaaaatg 380
Query: 178 gctttatcaagtgaagagctggacccacagtctgaaactcataagagttctttgttacag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctttatcaagtgaagagctggacccacagtctgaaactcataagagttctttgttacag 440
Query: 238 ttgtaaatgg 247
||||||||||
Sbjct: 441 ttgtaaatgg 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 650
Length adjustment: 9
Effective length of query: 238
Effective length of database: 641
Effective search space: 152558
Effective search space used: 152558
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no289_k11.g1 MSMg01no289_k11.g1 CHROMAT_FILE:
MSMg01no289_k11.g1 PHD_FILE: MSMg01no289_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:00 2005
(301 letters)
>mm_chr2_75516243_75516943
Length = 701
Score = 532 bits (275), Expect = e-155
Identities = 292/298 (97%)
Strand = Plus / Minus
Query: 1 aaatgagaccataggttattttatgaacaagtcttattgctcgtcgtgaccctgtgctta 60
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 498 aaatgaaaccataggttattttatgaacaagtcttattgctcgttgtgaccctgtgctta 439
Query: 61 gaacatttcataaatgatgctctctgtgcctttccccttcctccaggttgcccacattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaacatttcataaatgatgctctctgtgcctttccccttcctccaggttgcccacattcc 379
Query: 121 caaacaagatgccttgtactttgaagactgtatgcagcttttggcagagacattcccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caaacaagatgccttgtactttgaagactgtatgcagcttttggcagagacattcccatt 319
Query: 181 tgttgatgaccatgaggtataaaaatgtttgtttaacaacaaaactcccttatctgatat 240
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 318 tgtagatgaccatgaggtataaaaatgtttgtttaacagcaaaactcccttatctgatat 259
Query: 241 tagttcctttcatgtgtctccnattaagagaagaatagaaaattttagaaggaaaaaa 298
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 258 tagttcctttcatgtgtctccaattaagagaagaaaagaaaattttagaaggaaaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space: 202064
Effective search space used: 202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
