Query= MSMg01no290_d16.b1 MSMg01no290_d16.b1 CHROMAT_FILE:
MSMg01no290_d16.b1 PHD_FILE: MSMg01no290_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:43 2005
(649 letters)
>mm_chr2_160175191_160176239
Length = 1049
Score = 1208 bits (625), Expect = 0.0
Identities = 642/649 (98%), Gaps = 3/649 (0%)
Strand = Plus / Plus
Query: 1 aggtccgtgttggggcttgacagggcttagaatgaagaggaggtccaggctctctccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtccgtgttggggcttgacagggcttagaatgaagaggaggtccaggctctctccagt 260
Query: 61 ccctggctctggccaggaagacatatgtcatcagaggtgtgctggcagctcccagagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctggctctggccaggaagacatatgtcatcagaggtgtgctggcagctcccagagagc 320
Query: 121 agagtccacctaccttatcaggccagcctcattctgcactacacaaagctggcctctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagtccacctaccttatcaggccagcctcattctgcactacacaaagctggcctctggc 380
Query: 181 ctctgtccacttggacctgactagttccaggccatgtccccatggtttatcttgtggtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgtccacttggacctgactagttccaggccatgtccccatggtttatcttgtggtcc 440
Query: 241 caggctcagagggtcctcactgcctgcctgggaagcaagcagattagccccactttgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggctcagagggtcctcactgcctgcctgggaagcaagcagattagccccactttgaag 500
Query: 301 atgagaaagctaggactcaggagaactatagaacttctactggtatatctactttcattc 360
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 501 atgagaaagctaggactcaggagagctgtagaacttctactggtatatctactttcattc 560
Query: 361 gttcatttgatatttaaatggtatgctaataagaaccaagtattaggtaaagtgtgaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttcatttgatatttaaatggtatgctaataagaaccaagtattaggtaaagtgtgaggc 620
Query: 421 cagagaatgtgccagtactccagatctgctgtggccctgatgccacacaatgaccagtgg 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 cagagaatgtgccagtactccagatctgctgtggccctgatgctacacaatgaccagtgg 680
Query: 481 tttaaaatgcagtgccagacttaagctccactgctgctgctgctgctgctgctactgcta 540
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 681 tttaaaatgcagtgccagacttaagctc---tgctgctgctgctgctactgctactgcta 737
Query: 541 tctcgaatgtctccatttaatacaaaagggcttagttttcttttgagaatttaatacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tctcgaatgtctccatttaatacaaaagggcttagttttcttttgagaatttaatacaat 797
Query: 601 ttatatttttataacagcgtcttactatctatagatcagtttggcctcg 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ttatatttttataacagcgtcttactatctatagatcagtttggcctcg 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_d16.g1 MSMg01no290_d16.g1 CHROMAT_FILE:
MSMg01no290_d16.g1 PHD_FILE: MSMg01no290_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:43 2005
(288 letters)
>mm_chr2_160272518_160273205
Length = 688
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%)
Strand = Plus / Minus
Query: 1 ccacagtggtcctcaagctgggatgactggagcagtgagagctgagcagggagaaacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ccacagtggtcctcaagctgggatgactggagcagtgagagctgagcagggagaaacagg 429
Query: 61 ctcagtggaggatgcctgtatctagttggcactaagagccgatttgggctgacatctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctcagtggaggatgcctgtatctagttggcactaagagccgatttgggctgacatctggg 369
Query: 121 gaagtgtggcgagtgcttttgatgatgaagtgttttcagtggctgagaacaagcccctgg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gaagtgtggcgagcgcttttgatgatgaagtgttttcagtggctgagaacaagcccctgg 309
Query: 181 ggcctgcagagcaagcattcgctgtgccctgcttcccacagttcttcatttcctgaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggcctgcagagcaagcattcgctgtgccctgcttcccacagttcttcatttcctgaggaa 249
Query: 241 gcattccccaggctgtttctggccaaagagtagccgccagactccgga 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gcattccccaggctgtttctggccaaagagtagccgccagactccgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
