Query= MSMg01no290_p17.b1 MSMg01no290_p17.b1 CHROMAT_FILE:
MSMg01no290_p17.b1 PHD_FILE: MSMg01no290_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:39 2005
(683 letters)
>mm_chr2_133384522_133385604
Length = 1083
Score = 1224 bits (633), Expect = 0.0
Identities = 663/679 (97%), Gaps = 10/679 (1%)
Strand = Plus / Plus
Query: 5 gaattctctgtataatttcaatgaatagtcatgtttgataccttgatataaaggatggga 64
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gaattctctgtataatttcaatgaatagtcatgtttgataccttggtataaaggatggga 264
Query: 65 taagatctttcaaggcttaggctgatggaaacgctgctgaaagactagagattgctcttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagatctttcaaggcttaggctgatggaaacgctgctgaaagactagagattgctcttt 324
Query: 125 cctttggcatctgtcttgagtagtaatattgttctctgtgaaggcccacttattctgtct 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctttggcatctgtcttgggtagtaatattgttctctgtgaaggcccacttattctgtct 384
Query: 185 tgaaaattcttcttacctccagagtgataggcctcagggagtactgtttctatgtttgca 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 tgaaaattcttcttacctccagagtgataggccacagggagtactgtttctatgtttgca 444
Query: 245 gttgaaagatgacaatttcatatggtccaaacttggctttatttcttggtgagatattat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttgaaagatgacaatttcatatggtccaaacttggctttatttcttggtgagatattat 504
Query: 305 tctgttacttcaatgacctgtctccattatttatcttgaggctcacctcttcccttttgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctgttacttcaatgacctgtctccattatttatcttgaggctcacctcttcccttttgt 564
Query: 365 tgactgttgtagcaatttgtggaaggccctgggtagtcagcctttatactctgtctgtac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgactgttgtagcaatttgtggaaggccctgggtagtcagcctttatactctgtctgtac 624
Query: 425 aggaaataaagtgcatgtcaccatgccaaagtcaggagatgccggtgtgatttgctgtga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aggaaataaagtgcatgtcaccatgccaaagtcaggagatgccggtgtgatt-------- 676
Query: 485 ttagggtccacgggatgttgctactgtgtttattttctatcgatgaattgccttaggcag 544
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 677 --agggtccacgggattttgctactgtttttattttctatcgatgaattgccttaggcag 734
Query: 545 aaacattaagggacaccagaatggtgatgaaaggctttttataacagaagctaaatacag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaacattaagggacaccagaatggtgatgaaaggctttttataacagaagctaaatacag 794
Query: 605 tccttcatattttctaggaatgcccctgtcctaaagtaccattaaccgatagtggagttc 664
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tccttcatactttctaggaatgcccctgtcctaaagtaccattaaccgatagtggagttc 854
Query: 665 agaacataaatggctcccc 683
|||||||||||||||||||
Sbjct: 855 agaacataaatggctcccc 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_p17.g1 MSMg01no290_p17.g1 CHROMAT_FILE:
MSMg01no290_p17.g1 PHD_FILE: MSMg01no290_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:40 2005
(650 letters)
>mm_chr2_133412375_133413424
Length = 1050
Score = 673 bits (348), Expect = 0.0
Identities = 354/356 (99%)
Strand = Plus / Minus
Query: 295 ttgtaagacaggttggctagcgacaaatgcaatcactctttgattattcggtaatgtctt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 ttgtaagacaggttggctagcgacaaatgcaatcactctttgattattcggtaatgtctt 991
Query: 355 tccttcaccttcagttttgaaggatggttataacagatttcacattcttggtgcacagtc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 tccttcaccttcagttttgaaggatggttataacagatttcacattcttggtgcacagtc 931
Query: 415 tcactctcagagtacatcattccgacccagtgctttctggtgctctgattttcaatgggt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 tcactctcagagtacatcattccgacccagtgctttctggtgctctgattttcaatgggt 871
Query: 475 agtcagctaccaatcatgttcttgttgtcttgaggaagatgagggttttgggcttttttt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 agtcagctaccaatcatgttcttgttgtcttgaggaagatgagggttttgggcttttttt 811
Query: 535 tgttgttgttgtttttttcattttatttttttcatgattttctgtgtctgtgggtttagc 594
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 810 tgttgttgttgttgttttcattttattcttttcatgattttctgtgtctgtgggtttagc 751
Query: 595 agcatgacaataacatggtttggtgtggctgtatgtgtgtctgttggctttgtaga 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 agcatgacaataacatggtttggtgtggctgtatgtgtgtctgttggctttgtaga 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
