Query= MSMg01no291_l03.b1 MSMg01no291_l03.b1 CHROMAT_FILE:
MSMg01no291_l03.b1 PHD_FILE: MSMg01no291_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:33 2005
(194 letters)
>mm_chr2_132690385_132690978
Length = 594
Score = 375 bits (194), Expect = e-109
Identities = 194/194 (100%)
Strand = Plus / Minus
Query: 1 tctcctgggcacccagctcacctatccatatggctcaaatgacacttccttcctgcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tctcctgggcacccagctcacctatccatatggctcaaatgacacttccttcctgcagtt 335
Query: 61 atttgtccctcttcttactttcttttcctccaaaactcctaacacatcagcaatccttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atttgtccctcttcttactttcttttcctccaaaactcctaacacatcagcaatccttct 275
Query: 121 catccctctaagttgtgactgctaacttctgtcttccatgccttacagtaaggctaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 catccctctaagttgtgactgctaacttctgtcttccatgccttacagtaaggctaagat 215
Query: 181 agtgttagttgtgt 194
||||||||||||||
Sbjct: 214 agtgttagttgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no291_l03.g1 MSMg01no291_l03.g1 CHROMAT_FILE:
MSMg01no291_l03.g1 PHD_FILE: MSMg01no291_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:33 2005
(147 letters)
>mm_chr2_132527094_132527643
Length = 550
Score = 253 bits (131), Expect = 3e-72
Identities = 145/151 (96%), Gaps = 5/151 (3%)
Strand = Plus / Plus
Query: 1 attactccccagtttttatacagtaatagcaagtgccgagtttgcttctgctgccctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attactccccagtttttatacagtaatagcaagtgccgagtttgcttctgctgccctctt 260
Query: 61 gtg---gctgctgcccacagatttctgagggcgggtcgggg-gtgaaatgtgagttaaac 116
||| |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 261 gtggctgctgctgcccacagatttctgagggccggt-ggggcgtgaaatgtgagttaaac 319
Query: 117 cttttgtcattcattctctgctttgattaag 147
|||||||||||||||||||||||||||||||
Sbjct: 320 cttttgtcattcattctctgctttgattaag 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 147
Length of database: 550
Length adjustment: 8
Effective length of query: 139
Effective length of database: 542
Effective search space: 75338
Effective search space used: 75338
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
