Query= MSMg01no292_a08.b1 MSMg01no292_a08.b1 CHROMAT_FILE:
MSMg01no292_a08.b1 PHD_FILE: MSMg01no292_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:57 2005
(319 letters)
>mm_chr2_171023904_171024622
Length = 719
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Minus
Query: 5 gaattctagtctgtgggttgcagtcacactaatttgtacgtcttcattatttaaggacta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattctagtctgtgggttgcagtcacactaatttgtacgtcttcattatttaaggacta 459
Query: 65 taagatcttttcatgagagattataataacatgggagaaaatgcaaattatgcaagcata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 taagatcttttcatgagagattataataacatgggagaaaatgcaaattatgcaagcata 399
Query: 125 tttagatcatcagaactgctcattttaatacccacgaccactggaagccacttggatata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tttagatcatcagaactgctcattttaatacccacgaccactggaagccacttggatata 339
Query: 185 cccagtgttaactagcatatgaatatgcccattatcaaaaaagtcatggcaaaggaaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cccagtgttaactagcatatgaatatgcccattatcaaaaaagtcatggcaaaggaaata 279
Query: 245 tacgtttataaagcaagagtgccatattgggaagaacagtaaaacctgctagtgtaaacc 304
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tacgtttataaagcaaaagtgtcatattgggaagaacagtaaaacctgctagtgtaaacc 219
Query: 305 cagaaagccatgtt 318
||||||||||||||
Sbjct: 218 cagaaagccatgtt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_a08.g1 MSMg01no292_a08.g1 CHROMAT_FILE:
MSMg01no292_a08.g1 PHD_FILE: MSMg01no292_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:57 2005
(495 letters)
>mm_chr2_171002735_171003629
Length = 895
Score = 888 bits (459), Expect = 0.0
Identities = 486/499 (97%), Gaps = 8/499 (1%)
Strand = Plus / Plus
Query: 1 attacaacgaccccaacccttcacttaccctgaggtggcatgttctcatgaatcctgacc 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 attacaacgaccccaacccttcacttaccccgaggtggcatgttctcatgaatcctgacc 260
Query: 61 gagacacagaaatcctctacttattggattatttgatactttgcttatttaaagataaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagacacagaaatcctctacttattggattatttgatactttgcttatttaaagataaga 320
Query: 121 cttgatccacgaggaatattattatgagcctcaaagaaaaagaacagacattttgtggaa 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 cttgatccacgaggaatattattatgagcctctaagaaaaagaacagacattttgtggaa 380
Query: 181 cgcattgcctgtgtagctcttttcttttcctataattccataggtatcagttatgctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgcattgcctgtgtagctcttttcttttcctataattccataggtatcagttatgctctg 440
Query: 241 taaggaaggagtcttagaagtacctgcttgccaccgtgaacacgtgctatcacatgtttc 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 taaggaaggagtcttagaagtacctgcttgccaccatgaacacgtgctatcacatgtttc 500
Query: 301 ctcagcatgaagaagtgtggaagaactcagttagctgttcccccc----tcctgatgtcc 356
||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 501 ctcagcatgaagaagtgtggaagaactcagttagctgtttc----agtttcctgatgtcc 556
Query: 357 catgaagcatagaagataatggtctgtggctgtagaactctggaggttcaactagatgag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 catgaagcatagaagataatggtctgtggctgtagaactctggaggttcaactagatgag 616
Query: 417 gacatgcctccacattcatacaccttgtatcaggttcttctgtctgttacccagaatcat 476
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 617 gacatgcctccacattcatacaccttgtgtcaggttcttctgtctgttacccagaatcat 676
Query: 477 ctgtccccagccatgtacc 495
|||||||||||||||||||
Sbjct: 677 ctgtccccagccatgtacc 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
