Query= MSMg01no292_i03.b1 MSMg01no292_i03.b1 CHROMAT_FILE:
MSMg01no292_i03.b1 PHD_FILE: MSMg01no292_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:35 2005
(368 letters)
>mm_chr2_110400839_110401603
Length = 765
Score = 646 bits (334), Expect = 0.0
Identities = 356/364 (97%), Gaps = 3/364 (0%)
Strand = Plus / Minus
Query: 5 gaattcaactgatggacgtgtgtgagagcatggacacatgagcataaaatatccatggta 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaattcaactgatggaggtgtgtgagagcatggacacatgagcataaaatatccatggta 325
Query: 65 aaagcaaaagaagcaaacacttcagcagagctgaaggtggaagtgagggtaacgggaaca 124
||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaagcaaaagaaggaaaca--t-ggcagagctgaaggtggaagtgagggtaacgggaaca 268
Query: 125 aaatatgtgtaaatttcaaggttagaaaaatgaaatactctgaatcttaaactacagatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaatatgtgtaaatttcaaggttagaaaaatgaaatactctgaatcttaaactacagatt 208
Query: 185 cttctctcccgctcctttccctcaacctcaaccttaacttcttcctcccctctcgctctc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 207 cttctctcccgctcctttccctcaacctcaaccttaacttcttcctcccctctccctctc 148
Query: 245 cctctctccctccacacctctcactcccattaagtgctgctaaggagttttaagcaggaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cctctctccctccacacctctcactcccattaagtgctgctaaggagttttaagcaggaa 88
Query: 305 gtactttccattttaaattttaaaatgatttacctggctacaacagagagttgttagagg 364
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gtactttccattttaagttttaaaatgatttacctggctacaacagagagttgttagagg 28
Query: 365 ccaa 368
||||
Sbjct: 27 ccaa 24
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 765
Length adjustment: 9
Effective length of query: 359
Effective length of database: 756
Effective search space: 271404
Effective search space used: 271404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_i03.g1 MSMg01no292_i03.g1 CHROMAT_FILE:
MSMg01no292_i03.g1 PHD_FILE: MSMg01no292_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:35 2005
(341 letters)
>mm_chr2_110326830_110327570
Length = 741
Score = 621 bits (321), Expect = 0.0
Identities = 336/341 (98%)
Strand = Plus / Plus
Query: 1 aggctgtgaggggaaaagctgttctgggtcattcgcatggggaacagagaagaaaggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggctgtgaggggaaaagctgttctgggtcattcgcatggggaacagagaagaaaggaga 260
Query: 61 cagtcagctgctacctggcagcagcctggagccagggtgtcgtctggacttgggtttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtcagctgctacctggcagcagcctggagccagggtgtcgtctggacttgggtttcct 320
Query: 121 gctggagtcaagcaggccctctgttacataaggccttggtggctgctccaatgcaaagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 gctggagtcaagcaggccctctgttacataaggccttggtggctgctccaaggcaaagcc 380
Query: 181 actgtctgtgggacacacccaggtctgctctcaggagccctactttattccagcaaacca 240
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 actgtctgcgggacacacccaggtctgctctcaggagccctactttatttcagcaaacca 440
Query: 241 ctcctgttaacaacccttctttttaaaaaatctgacatgccctcgcccggtgcactcttc 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 ctcctgttaacaacccttctttttaaaaaatctgacatgcccttgcccggtgcactcttc 500
Query: 301 tccaacagaaagtgagacagaactgccctgagattgagcct 341
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 tccaagagaaagtgagacagaactgccctgagattgagcct 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
