Query= MSMg01no292_o23.b1 MSMg01no292_o23.b1 CHROMAT_FILE:
MSMg01no292_o23.b1 PHD_FILE: MSMg01no292_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:09 2005
(320 letters)
>mm_chr2_26832119_26832838
Length = 720
Score = 543 bits (281), Expect = e-159
Identities = 307/323 (95%), Gaps = 14/323 (4%)
Strand = Plus / Plus
Query: 5 gaattcagtcccagatctcatgtggtggaaggagacagccaatcctctgacctccatata 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtcccagaactcatgtggtggaaggagacagccaatcctctgacctccatata 264
Query: 65 tgtgcccatacactacataaggaaatgtaaaccaattgaaaacaacctgataaactggtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgcccatacactacataaggaaatgtaaaccaattgaaaacaacctgataaactggtt 324
Query: 125 ctaggtatcagttccagccagtgactaagatatccggtctcctcctcctttctcaggtct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctaggtatcagttccagccagtgactaagatatccggtctcctcctcctttctcaggtct 384
Query: 185 gctgcagagaagcgggaggggtggtggtcaggaggagaccctggctgtggctctgagtag 244
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgcagagaagcaggaggggtggtggtcaggaggagaccctggctgtggctctgagtag 444
Query: 245 catctggttcagccctgtagctttctctagaatg--t-----tttttttttcagcctggt 297
|||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 445 catctggttcagccctgtagctttctctagaatggctccaggtt-------cagcctggt 497
Query: 298 cactttgcatccacctcaccagt 320
|||||||||||||||||||||||
Sbjct: 498 cactttgcatccacctcaccagt 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_o23.g1 MSMg01no292_o23.g1 CHROMAT_FILE:
MSMg01no292_o23.g1 PHD_FILE: MSMg01no292_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:09 2005
(250 letters)
>mm_chr2_27009767_27010416
Length = 650
Score = 414 bits (214), Expect = e-120
Identities = 241/250 (96%)
Strand = Plus / Minus
Query: 1 agtgcaaagggcagaaggggaaaggtggggggcttggaccagctccagaccccctcatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 450 agtgcaaagggcagaaggggaaaggtggggggcttggaccagctccagaggctctcatgc 391
Query: 61 gggtggcagccatgcctaaagaaagagtggcaaggcaaagaatggagaaaatgggaaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gggtggcagccatgcctaaagaaagagtggcaaggcaaagaatggagaaaatgggaaggt 331
Query: 121 tgttccaagccacaggacaaccctgtcttcacagttgatgaactcattgctgggaagagc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 330 tgttccaagccacaggacaaccctgtcttcacagctgatgaactcattgctgggaagagc 271
Query: 181 gcataaaacaggcccgcaccacagtagcccatgctcggataatagtaagactaggagtct 240
||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 270 gcagaaaacaggcctgcaccacagtagcccatgcttagataatagtaagactaggagtct 211
Query: 241 gatacccaga 250
||||||||||
Sbjct: 210 gatacccaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
