Query= MSMg01no292_p03.b1 MSMg01no292_p03.b1 CHROMAT_FILE:
MSMg01no292_p03.b1 PHD_FILE: MSMg01no292_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:10 2005
(232 letters)
>mm_chr2_169512785_169513416
Length = 632
Score = 383 bits (198), Expect = e-111
Identities = 221/230 (96%), Gaps = 4/230 (1%)
Strand = Plus / Plus
Query: 1 cacttgaaagcagggtagcaggaacaagaaacacagccaggcacaaagctcacccttacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacttgaaagcagggtagcaggaacaagaaacacagccaggcacaaagctcacccttacc 260
Query: 61 acgtctcttcatttcgcaacatgggaccaatcagttatcattctagaactctccccatcc 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgtctcttcatttcgcaacgtgggaccaatcagttatcattctagaactctccccatcc 320
Query: 121 tgtgaaatatagataacaatggtccatgcttcaccaagtcgcactggaaccaaatacagc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgaaacatagataacaatggtccatgcttcaccaagtcgcactggaaccaaatacagc 380
Query: 181 cacatacctcagtttgac--tactttctcgagggtagctcatgtgcgtga 228
|||||||||||| ||| | |||||||||||||||||||||||||||
Sbjct: 381 cacatacctcagcgagacatt--tttctcgagggtagctcatgtgcgtga 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no292_p03.g1 MSMg01no292_p03.g1 CHROMAT_FILE:
MSMg01no292_p03.g1 PHD_FILE: MSMg01no292_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:10 2005
(245 letters)
>mm_chr2_169692742_169693392
Length = 651
Score = 408 bits (211), Expect = e-118
Identities = 234/245 (95%), Gaps = 6/245 (2%)
Strand = Plus / Minus
Query: 1 agctttgaagagagctcattgctcccagggctaatgtcctgcccagctgcgcacagagag 60
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 agctttgacgagagctcattgctcccagggctaatgtcctgcccagctgtgcacagagag 386
Query: 61 tgctgtcaacctttcagcattctttcccactgtggcctgctctatatcctggataggtga 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgctgtcagcctttcagcattctttcccactgtggcctgctctatatcctggataggtga 326
Query: 121 gtgtgagatgtgccctgtgggggcggctgagtgtgagtgtgtcctgtgggcacaggtgag 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtatgagatgtgccctgtgggggcggctgagtgtgagtgtgtcctgtgggcacaggtgag 266
Query: 181 agtgagttgtgccctgtaggggcag------gtgagtgtgtcctgtgggcacaggtgagt 234
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 tgtgagttgtgccctgtaggggcaggtgagtgtgagtgtgtcctgtgggcacaggtgagt 206
Query: 235 gtgag 239
|||||
Sbjct: 205 gtgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 651
Length adjustment: 9
Effective length of query: 236
Effective length of database: 642
Effective search space: 151512
Effective search space used: 151512
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
