Query= MSMg01no293_a10.b1 MSMg01no293_a10.b1 CHROMAT_FILE:
MSMg01no293_a10.b1 PHD_FILE: MSMg01no293_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:16 2005
(320 letters)
>mm_chr2_8137168_8137887
Length = 720
Score = 574 bits (297), Expect = e-168
Identities = 312/317 (98%)
Strand = Plus / Minus
Query: 4 ggaattcaaggcatatggtaccacgcccggcctggatttccactctcatactcttattat 63
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaattcagggcatatggtaccacgcccggcctggatttccactctcatactcttattat 461
Query: 64 cattaagagcaaataccattttcccatgaattcctgtagaccctgaggtttgaaacggtc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cattaagagcaaataccattttcccatgaattcctgtagaccctgaggtttgaaacggtc 401
Query: 124 tttcgatgagtggaaacaaaggcatttctgggttgtaaccaggactgaaccacccccaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tttcgatgagtggaaacaaaggcatttctgggttgtaaccaggactgaaccacccccaga 341
Query: 184 gaacagatggcagcagatttaatgttccggaaagacctccttgtcttatgcttttcctac 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 340 gaacagatggcagcagatttaatgttccggaaagacctccttgtcttaggcttttcctac 281
Query: 244 tagtggctgccctgagtagttattttgccccacttatatttagtagtgttgatcactgct 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 280 tagtggctgccctgagtagttattttgccccacttgcatttagtagtgttgatcactgcc 221
Query: 304 aattttatcccttcttt 320
|||||||||||||||||
Sbjct: 220 aattttatcccttcttt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_a10.g1 MSMg01no293_a10.g1 CHROMAT_FILE:
MSMg01no293_a10.g1 PHD_FILE: MSMg01no293_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:17 2005
(289 letters)
>mm_chr2_7971806_7972494
Length = 689
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1 tttaaaaagaattatatctctgttggtgtcaaataagggtgggagaagaaagtagagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaaaagaattatatctctgttggtgtcaaataagggtgggagaagaaagtagagcag 260
Query: 61 aacaaaggaacaaatttccctcagctggtaataaaactctagattcaccctatcatggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaaaggaacaaatttccctcagctggtaataaaactctagattcaccctatcatggat 320
Query: 121 atcctaatctccccgagatacattgttcttagaaacaggtgccagtttgagtgacaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcctaatctccccgagatacattgttcttagaaacaggtgccagtttgagtgacaatca 380
Query: 181 gtttctcaaagttggtgatcttgtcattgactttgcacttgccctgggcattctttccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtttctcaaagttggtgatcttgtcattgactttgcacttgccctgggcattctttccca 440
Query: 241 cattgtttttgtaaaccacaggacctattgtggctggtgcttcaatctc 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattgtttttgtaaaccacaggacctattgtggctggtgcttcaatctc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
