ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTCCAACCTCACCCTCTCAAGTGTTGTGATTATAGGCGCATATCATG
CCACCTAAAGTAACAGTCATAACTAATGCTTTTCTAATTAATGGCCCTCA
TTTTATAATACTCTAAAATAATTAAAAGCTTAATTACCTTAAATCGAAAG
TGTGACAAGGCCCCTGCAAGAACATTGAAAGGTTCCTTTGTGACTTTGGA
AATAGCTACTTTTCTGGATAGTTCATTTGGTGATATGAAATAGCAGAAAT
GGAAAGGTCTTTGCAGTTGGGTCTTGTATTAGTGATAGCTGTATCCAACT
GTGATTTTATAACTGTTTTACAATGCCCATGCCCGAAACAGGATTACTTT
AGTTCAAAGTCAATTGCCACCGCCTGTGTGACACTCCATGGAATCATACA
TTGATCCAAGTTGATAGAAACCCATTTTTAAAATGTATAATTGGCATCCA
GCCTGGAGGATTTTGTGTGTGTGTGTGTGCGCGCGCGCGAGTGCGTGTGT
GTTTGTCTATTTCCACACCTTTCTTCGTTTTCCTTTCTGTTGTTCCCTTT
TTTTTTCCTATGTCCTTTCTTTCCCTTACTGTTCGTTAGTGCCTTTCCTC
TTATACTTTCTTTCTACATTTCTTCTATCTCTTTCTTTCGTCATTCCTTC
CGTTCTTATTCATTTCCCTTCCTTATGCTTTTTCACTTTTCCTTTTCCCT
CTCTCCCCATTTCTTTATCATTTTN

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAAAGAAATGAGGGTGGCTTAGCTGATG
CAGAGAATTCTGAAAGGTGCTGATGAAATATCAAACCAGTTGAAAACCCC
TGACATTGAGCATCTAGCTGTATAATCAGAAGACAATGTCAACTATGGCC
AGGAGATTGCCCAAGCCAACAAAGATTCACCTCTCATGCTTCAAGCCATG
TCCACTGAGTTTAATCACTTCCTGGGCATACTTAGAGGCCACTTTATTTC
CCAGAGTTTCTCCATAGCGCTTTGCTTCTATTAGTTCAGCAGACAGTTAT
ATTACACACCACTGCCTGNTTATCCCCNACGNCCCACCAGTATCCCGCTG
AATATTTGTTTTACAATCCCCCATGAAAACAAAAAAAAAGACTCCTCGCG
GTGCGGGGGCTAACTGCCTTTCTTCTCCTCAGAGGAACCACTCTTAGGCT
CTTAGTCAGAAAGACTTGTCCACCACAGTGACACTGCCTACTGTCTTAGA
TCTTCATAACATTCACCAATTCTCCAATTAACAAAGTTTACTTATCTATT
ATTCCTTTGCTTGTCTGCTCATTATTCTTGTAATAGAACCTGTCATTTTC
TTATTGTCACGACTTTCTTTAACCTTCTTGCCGAGTGAAATCTTGATCAT
GTTTTCTCACACTATTACCCGTACCTCTTACTTTTTACTTTCACA

Query= MSMg01no295_n04.b1 MSMg01no295_n04.b1 CHROMAT_FILE:
MSMg01no295_n04.b1 PHD_FILE: MSMg01no295_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:51 2005
         (323 letters)



>mm_chr2_64225447_64226169
          Length = 723

 Score =  584 bits (302), Expect = e-171
 Identities = 314/318 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctccaacctcaccctctcaagtgttgtgattataggcgcatatcatgccaccta 64
           ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattgctccaacctcaccctctcaagtgttgtgattataggtgcatatcatgccaccta 264

                                                                       
Query: 65  aagtaacagtcataactaatgcttttctaattaatggccctcattttataatactctaaa 124
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagtaacagtcataactaacgcttttctaattaatggccctcattttataatactctaaa 324

                                                                       
Query: 125 ataattaaaagcttaattaccttaaatcgaaagtgtgacaaggcccctgcaagaacattg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataattaaaagcttaattaccttaaatcgaaagtgtgacaaggcccctgcaagaacattg 384

                                                                       
Query: 185 aaaggttcctttgtgactttggaaatagctacttttctggatagttcatttggtgatatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaggttcctttgtgactttggaaatagctacttttctggatagttcatttggtgatatg 444

                                                                       
Query: 245 aaatagcagaaatggaaaggtctttgcagttgggtcttgtattagtgatagctgtatcca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 445 aaatagcagaaatggaaaggtctttgcagttgggtcttgtattagtgatagctatatcca 504

                             
Query: 305 actgtgattttataactg 322
           ||||||||||||||||||
Sbjct: 505 actgtgattttataactg 522


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no295_n04.g1 MSMg01no295_n04.g1 CHROMAT_FILE:
MSMg01no295_n04.g1 PHD_FILE: MSMg01no295_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:51 2005
         (288 letters)



>mm_chr2_64384918_64385605
          Length = 688

 Score =  549 bits (284), Expect = e-161
 Identities = 287/288 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaagaaatgagggtggcttagctgatgcagagaattctgaaaggtgctgatgaaatatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 caaagaaatgagggtggcttagctgatgcagagaattctgaaaggtgctgatgaaatatc 429

                                                                       
Query: 61  aaaccagttgaaaacccctgacattgagcatctagctgtataatcagaagacaatgtcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aaaccagttgaaaacccctgacattgagcatctagctgtataatcagaagacaatgtcaa 369

                                                                       
Query: 121 ctatggccaggagattgcccaagccaacaaagattcacctctcatgcttcaagccatgtc 180
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctatagccaggagattgcccaagccaacaaagattcacctctcatgcttcaagccatgtc 309

                                                                       
Query: 181 cactgagtttaatcacttcctgggcatacttagaggccactttatttcccagagtttctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cactgagtttaatcacttcctgggcatacttagaggccactttatttcccagagtttctc 249

                                                           
Query: 241 catagcgctttgcttctattagttcagcagacagttatattacacacc 288
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 catagcgctttgcttctattagttcagcagacagttatattacacacc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space:   189441
Effective search space used:   189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)