Query= MSMg01no296_g04.b1 MSMg01no296_g04.b1 CHROMAT_FILE:
MSMg01no296_g04.b1 PHD_FILE: MSMg01no296_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:34 2005
(282 letters)
>mm_chr2_160150150_160150831
Length = 682
Score = 499 bits (258), Expect = e-146
Identities = 276/282 (97%), Gaps = 2/282 (0%)
Strand = Plus / Plus
Query: 1 tcccctggccctcaccttgctggtatccagctggataccttgtcatctttgcttcacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccctggccctcaccttgctggtatccagctggataccttgtcatctttgcttcacagg 260
Query: 61 cacacatttggggtcttgaagtcaccaaccaagaaccaggttcagccaatatccttacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacacatttggggtcttgaagtcaccaaccaagaaccaggttcagccaatatccttacac 320
Query: 121 aaatgggttgctagatttactcaatgaaagcactaggcaggaagtaagatcgaaatttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatgggttgctagatttactcaatgaaagcactaggcaggaagtaagatcgaaatttca 380
Query: 181 gaaaaagagtatatcatcttgtatctgccatgccaatttggattatatttattactaaac 240
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaaagagcagatcatcttgtatctgccatgccaatttggattatatttattactaaac 440
Query: 241 atgttctgctttgggttttttgggttttttggctttt-tttt 281
|||||||| |||||||||||||| |||||||| |||| ||||
Sbjct: 441 atgttctgttttgggttttttgg-ttttttgggttttgtttt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_g04.g1 MSMg01no296_g04.g1 CHROMAT_FILE:
MSMg01no296_g04.g1 PHD_FILE: MSMg01no296_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:34 2005
(284 letters)
>mm_chr2_160321279_160321962
Length = 684
Score = 511 bits (264), Expect = e-149
Identities = 279/284 (98%)
Strand = Plus / Minus
Query: 1 agaagccgatgctaagggtcaaacagattgaaagtttgagttcatgccagatcacactgg 60
|||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 484 agaagccgatgctaagggtcaagcagattgaaagtttgagttcatggtagatcacactgg 425
Query: 61 tacacgtgtggtttggatcaaggaagcagaaggtttagagaagtgttggggagattcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tacacgtgtggtttggatcaaggaagcagaaggtttagagaagtgttggggagattcaaa 365
Query: 121 taggagcagtgataaggggagtatgggataaggaggcagttggtagagatctggggtact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 taggagcagtgataaggggagtatgggataaggaggcagttggtagagatctggggtact 305
Query: 181 ctggggatggggatccggggtaatggaacaggcagaactttcttcattcttaacatctca 240
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctggggagggggatccggggtaacggaacaggcagaactttcttcattcttaacatctca 245
Query: 241 cgtctgaccacagcctcagaaagctattgacccaggaagcagat 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cgtctgaccacagcctcagaaagctattgacccaggaagcagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
