Query= MSMg01no296_m20.b1 MSMg01no296_m20.b1 CHROMAT_FILE:
MSMg01no296_m20.b1 PHD_FILE: MSMg01no296_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:05 2005
(349 letters)
>mm_chr2_151603175_151603923
Length = 749
Score = 613 bits (317), Expect = e-180
Identities = 339/349 (97%), Gaps = 5/349 (1%)
Strand = Plus / Plus
Query: 1 accctgtctcagaagagcaagatggggagaaagaaaagaagaggcccaacagcagcctct 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 206 accctgtctcagaagagcaagatggggagaaagaa-----gaggcccaacagcagcctct 260
Query: 61 ggcttccacacgcacatgcacacatgtgaacaacatggcttcctcacttacacagataga 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcttccacacgcacatgcatacatgtgaacaacatggcttcctcacttacacagataga 320
Query: 121 cttcatatttatacaaaactaagtatatagaaactatatatgatattaaaatagatgaga 180
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 cttcgtatttatacaaaactaagtatatagaaactgtatatgatattaaaatagatgaga 380
Query: 181 agccaatgatactttcttaagcaatttgctagaaactgaagtacagacaacaggaaccaa 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccagtgatactttcttaagcaatttgctagaaactgaagtacagacaacaggaaccaa 440
Query: 241 atgggcaaaggtcaatataaagatggaggaaaggctggagacttgacctagctgttaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgggcaaaggtcaatataaagatggaggaaaggctggagacttgacctagctgttaaga 500
Query: 301 acactggttgctcttgtagaggacctgggtttatttcccattactcaca 349
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 acactggttgctcttgtagaggacctgggtttatttcccattacccaca 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_m20.g1 MSMg01no296_m20.g1 CHROMAT_FILE:
MSMg01no296_m20.g1 PHD_FILE: MSMg01no296_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:05 2005
(239 letters)
>mm_chr2_151672596_151673234
Length = 639
Score = 437 bits (226), Expect = e-127
Identities = 235/238 (98%)
Strand = Plus / Minus
Query: 1 tcctcaggatccatcagagcctggccaggagaactcagcaaatgtggtatccaaaaccct 60
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcctcgggacccatcagagcctggccaggagaactcagcaaatgtggtatccaaaaccct 379
Query: 61 tccatgaccaacactggctctgtccacagtgcaatttccatcttctccctgtcatgtagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tccatgaccaacactggctctgtccacagtgcaatttccatcttctccctgtcatgtagc 319
Query: 121 tgggagtagctgggctcccctttctcttgccacactaatgtcctgcttaatgacctgaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 318 tgggagtagctgggctcccctttctcttgccacactaatgtcctgcttaatgacctaaag 259
Query: 181 aggctccgcctggacatgacagtcagtcccaacagagtcccttgctagctgtaggcac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aggctccgcctggacatgacagtcagtcccaacagagtcccttgctagctgtaggcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
