Query= MSMg01no297_e02.b1 MSMg01no297_e02.b1 CHROMAT_FILE:
MSMg01no297_e02.b1 PHD_FILE: MSMg01no297_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:39 2005
(692 letters)
>mm_chr2_6716533_6717625
Length = 1093
Score = 1255 bits (649), Expect = 0.0
Identities = 679/689 (98%), Gaps = 1/689 (0%)
Strand = Plus / Plus
Query: 5 gaattcattaaagaccc-cactgaacttttgaactgctttagttcctaatatgttgcctt 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattaaagactcacactgaacttttgaactgctttagttcctaatatgttgcctt 264
Query: 64 gcacagacgccatcaggagaaaactggtttaaaaattcttctactttaacatttaacaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcacagacgccatcaggagaaaactggtttaaaaattcttctactttaacatttaacaaa 324
Query: 124 cgtgaaaaatatgcaaggccgtgaaaagcagatcgctgccttaccttctttgaagttttg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 cgtgaaaaatatgcaaggccgtgaaaagcagatcgctgccttaccttctttgaagtttcg 384
Query: 184 aaaaagcaaagctagtttattttagggagagaaaatgttagaataaaacttgaagcttac 243
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaagcaaaactagtttattttagggagagaaaatgttagaataaaacttgaagcttac 444
Query: 244 aaacttgatgaaaatgttctgtcacaaggaatatggtcagtttaaaaggcatggattatg 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 445 aaacttgatgaaaatgttctgtcacaaggaatatgatcagtttaaaaggcatgaattatg 504
Query: 304 acacaatatttctgtaagtgtatattgttgttatcgggccattggtactggtagaataat 363
||||||| |||||||||||| |||||||||||||||||| |||| |||||||||||||||
Sbjct: 505 acacaatgtttctgtaagtgcatattgttgttatcgggctattgctactggtagaataat 564
Query: 364 attgataaaagatcctatcattaagcactgacatttttagaagaatacggacaggaaaag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attgataaaagatcctatcattaagcactgacatttttagaagaatacggacaggaaaag 624
Query: 424 cttcttgtttgttaacaaaggcatctcccagggcaactgtgatgcccacagaaaagcata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cttcttgtttgttaacaaaggcatctcccagggcaactgtgatgcccacagaaaagcata 684
Query: 484 atttagaatggaagggtgttactaatgtccttcagctgggcagccttagctagaaatctc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atttagaatggaagggtgttactaatgtccttcagctgggcagccttagctagaaatctc 744
Query: 544 atgagcactcaacacacactcatttttttccctgtgagtttttagtaacagtctagtgtc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgagcactcaacacacactcatttttttccctgtgagtttttagtaacagtctagtgtc 804
Query: 604 acctcttaaaataacagaagccaaaccaaaatcatgtaatcacttacagacaatccaaag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 acctcttaaaataacagaagccaaaccaaaatcatgtaatcacttacagacaatccaaag 864
Query: 664 tgcagaggcaatatatcgtccaccatcta 692
|||||||||||||||||||||||||||||
Sbjct: 865 tgcagaggcaatatatcgtccaccatcta 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1093
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1083
Effective search space: 738606
Effective search space used: 738606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_e02.g1 MSMg01no297_e02.g1 CHROMAT_FILE:
MSMg01no297_e02.g1 PHD_FILE: MSMg01no297_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:39 2005
(582 letters)
>mm_chr2_6894337_6895319
Length = 983
Score = 1013 bits (524), Expect = 0.0
Identities = 567/582 (97%), Gaps = 4/582 (0%)
Strand = Plus / Minus
Query: 3 agaaatgttttatttcatacctcattctgagaaataccattttacccatcctctggtctt 62
||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||
Sbjct: 846 agaaatgttttatttcatacctcatcccgagaaatacc-gtttacccatcctctggtctt 788
Query: 63 aaaattcttaacacatacagaccttttacttagaaaaatatctctacctcacctataatt 122
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 787 aaaattcttaacacacacagacctttttcttagaaaaatatctctacctcacctataatt 728
Query: 123 ccagaatgtagaaaagctgaggcaggaaaatggagaatttgaggccagcctgatctacat 182
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 727 ccagaatgtagaaaagctgaggcaggaaaatggaggatttgaggccagcctgatctacat 668
Query: 183 atcaagtctttttcttcagtaaggaaagataagaaaatgattgttttt--gtgtgtgtca 240
|||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||
Sbjct: 667 atcaagtctttttcttcagtaaggaaagataagaaaatgaat-tttttgagtgtgtgcca 609
Query: 241 aagaaatagtgaaaatatatgtttgtgggtttctatttcacattagaaatggaactttat 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aagaaatcgtgaaaatatatgtttgtgggtttctatttcacattagaaatggaactttat 549
Query: 301 gtttagtttcctctgactttaaatgtaaaattcttagagatacttccaaattgtctagct 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gtttagttgcctctgactttaaatgtaaaattcttagagatacttccaaattgtctagct 489
Query: 361 tttggtatctcttaggaataagtggttatgttttctttctttttcttgttttacttgcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tttggtatctcttaggaataagtggttatgttttctttctttttcttgttttacttgcat 429
Query: 421 atcttagaatttaatatgcttagattctcattcactcagttcctctgagccttggttttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atcttagaatttaatatgcttagattctcattcactcagttcctctgagccttggttttc 369
Query: 481 tcatgtgaacgatggccataatcatcttgtgaggaacaaaagataaaatgtggataaggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tcatgtgaacgatggccataatcatcttgtgaggaacaaaagataaaatgtggataaggt 309
Query: 541 tctgggcaaagggattaaagcatagaaagtacatgggtcttt 582
||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 308 tctgggcaaagggattaaagcatagcaagtacatgggtcttt 267
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 983
Length adjustment: 10
Effective length of query: 572
Effective length of database: 973
Effective search space: 556556
Effective search space used: 556556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
