Query= MSMg01no297_h05.b1 MSMg01no297_h05.b1 CHROMAT_FILE:
MSMg01no297_h05.b1 PHD_FILE: MSMg01no297_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:54 2005
(598 letters)
>mm_chr2_124385072_124386069
Length = 998
Score = 1098 bits (568), Expect = 0.0
Identities = 589/596 (98%)
Strand = Plus / Minus
Query: 3 ggaattcattattttatactttaatttgcatttatgttttgacatatcttggggacaaag 62
|||||||||||||||||| |||||||||| | |||||||||||||| |||||||||||||
Sbjct: 798 ggaattcattattttataatttaatttgcgtctatgttttgacataccttggggacaaag 739
Query: 63 gccacttctgacagttttcttgagtgtgtcatgttgccctttgtaaggttgcatagagac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gccacttctgacagttttcttgagtgtgtcatgttgccctttgtaaggttgcatagagac 679
Query: 123 aagtgagatagatagtgcttcagatttctcagtgtagctctcctatctggctgaaatgaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aagtgagatagatagtgcttcagatttctcagtgtagctctcctatctggctgaaatgaa 619
Query: 183 ggttttcatttttcaactcaattcagcatcattttctggttcttatgcactgagtataat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ggttttcatttttcaactcaattcagcatcattttctggttcttatgcactgagtataat 559
Query: 243 gagatttgctttgagttatcaacactgcaggggaatgtttaaattagaaagagaaacccc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gagatttgctttgagttatcaacactgcaggggaatgtttaaattagaaagagaaacccc 499
Query: 303 gccatcgatttctttgaaaatggaataaaaacacaaagatattttccctatattctatta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gccatcgatttctttgaaaatggaataaaaacacaaagatattttccctatattctatta 439
Query: 363 tcaaaatataacccacattcaaagcaatcataccaacaatgccattgttttctcaagatt 422
||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcaaaatataatctaaattcaaagcaatcataccaacaatgccattgttttctcaagatt 379
Query: 423 gtgaatttggttcaggaaatgtatttatcaaaagtaattaaatggaaataagaatcttta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtgaatttggttcaggaaatgtatttatcaaaagtaattaaatggaaataagaatcttta 319
Query: 483 tatactactgcataatatttcttgctaccatatataggaacagctaatgttgagtaaata 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tatactactgcataatatttcttgctaccatatataggaacagctaatgttgagtaaata 259
Query: 543 ggagaatagatggaaaaatgcagatatcttgccttaagtcccttgactttggaatt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggagaatagatggaaaaatgcagatatcttgccttaagtcccttgactttggaatt 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_h05.g1 MSMg01no297_h05.g1 CHROMAT_FILE:
MSMg01no297_h05.g1 PHD_FILE: MSMg01no297_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:54 2005
(345 letters)
>mm_chr2_124204629_124205371
Length = 743
Score = 652 bits (337), Expect = 0.0
Identities = 341/343 (99%), Gaps = 2/343 (0%)
Strand = Plus / Plus
Query: 1 catgccacttgggaaatcctaacgcctacagctgcactctccagctgctggagcatgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgccacttgggaaatcctaacgcctacagctgcactctccagctgctggagcatgtgc 260
Query: 61 aaaacttcactaggaagccaacggtgggccatctggacacttaactgattttgtcaccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaacttcactaggaagccaacggtgggccatctggacacttaactgattttgtcaccat 320
Query: 121 caggaaagggaagaaaaaaatccaatcatcctccaaggtctgcgtaggatgggacatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggaaagggaagaaaaaaatccaatcatcctccaaggtctgcgtaggatgggacatttg 380
Query: 181 aaccattgtgctttctgtgtcccctccacaaaatatgaatggcagtccacttggattctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaccattgtgctttctgtgtcccctccacaaaatatgaatggcagtccacttggattctg 440
Query: 241 actactgaaagacaagtgttaagtgcaactatattggaaggattaactgtaatagttaag 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 actactgaaagacaagtgttaagtgcaactat--tggaaggattaactgtaatagttaag 498
Query: 301 tagatagcctagtcaaatttctgtcaatacttcattgaggtat 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tagatagcctagtcaaatttctgtcaatacttcattgaggtat 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 743
Length adjustment: 9
Effective length of query: 336
Effective length of database: 734
Effective search space: 246624
Effective search space used: 246624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
