Query= MSMg01no299_j23.b1 MSMg01no299_j23.b1 CHROMAT_FILE:
MSMg01no299_j23.b1 PHD_FILE: MSMg01no299_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:36 2005
(632 letters)
>mm_chr2_140671644_140672675
Length = 1032
Score = 1183 bits (612), Expect = 0.0
Identities = 627/632 (99%)
Strand = Plus / Plus
Query: 1 aaatggaaagtatgcatgacctatctagggtatttttggagcaagcatacaaactagact 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 aaatggaaagtatgcatgacctatctagggtatctttggagcaagcatacaaactagact 260
Query: 61 agctcatctggcaagcactttgtccaactgagagaccatgccttgatgaacaatatggtc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 agctcatctggcaagcactttgtccaactgagagaccatgccttgatgaataatatggtc 320
Query: 121 tatcaaagaagatacctaacgtcatcctccatcctccaaatgcatgaacatgtacttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatcaaagaagatacctaacgtcatcctccatcctccaaatgcatgaacatgtacttata 380
Query: 181 catgtacacacacactaatgtgtgaaaatatgcatacacatatgtaatacaccacaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgtacacacacactaatgtgtgaaaatatgcatacacatatgtaatacaccacaaaca 440
Query: 241 catacaaaaaataatataaattaaacccagacatacaaatgccaaaaacgttttaaattt 300
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 catacaaaaaataataaaaattaaactcagacatacaaatgccaaaaacgttttaaattt 500
Query: 301 ctttgctttgttctatgtgagtatatgtttattcatttgaaaattaataattgcatatgt 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttgttttgttctatgtgagtatatgtttattcatttgaaaattaataattgcatatgt 560
Query: 361 ttttgtaagtacatgatggttgatctatgtatacattgtagaatgagcaattcaagctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttgtaagtacatgatggttgatctatgtatacattgtagaatgagcaattcaagctga 620
Query: 421 tttacatatctgctatctcaccaaattggtgtacatatagttgaaatattaaaaatataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttacatatctgctatctcaccaaattggtgtacatatagttgaaatattaaaaatataa 680
Query: 481 ttttagcaatgtttgtggtgaaaagcagtaagaactagccagctgtatcgagcctaaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttagcaatgtttgtggtgaaaagcagtaagaactagccagctgtatcgagcctaaatg 740
Query: 541 attcagttttctcaacaagctgaacacctgccttcatctctctatcagaagagagaagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attcagttttctcaacaagctgaacacctgccttcatctctctatcagaagagagaagag 800
Query: 601 tgttgactttggacacatcagtgtggcagggc 632
||||||||||||||||||||||||||||||||
Sbjct: 801 tgttgactttggacacatcagtgtggcagggc 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_j23.g1 MSMg01no299_j23.g1 CHROMAT_FILE:
MSMg01no299_j23.g1 PHD_FILE: MSMg01no299_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:36 2005
(295 letters)
>mm_chr2_140835111_140835805
Length = 695
Score = 526 bits (272), Expect = e-154
Identities = 290/300 (96%), Gaps = 8/300 (2%)
Strand = Plus / Minus
Query: 1 acttccttcagggtgactctcacacttaggatgtagaatgtctaatcccaggtgatcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 acttccttcagggtgactctcacacttaggatgtagaatgtctaatcccaggtgatcact 377
Query: 61 cctggccacacatacatataagcactattaacatatatgcctatatttgtaataataatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cctggccacacatacatataagcactattaacatatatgcctatatttgtaataataatt 317
Query: 121 aaagaagagaccatacatttgcaaaggagaacataggaggttatagaaggaaggaggatg 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 316 aaagaagagaccatacatttgcaaaggagaacataggaggttatggaaggaaggaggatg 257
Query: 181 aaattatttaaataaagtatttgtgtaaaaggttctcaaaaaattaaatgtaaaaaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aaattatttaaataaagtatttgtgtaaaaggttctcaaaaaattaaatgtaaaaaagaa 197
Query: 241 agaaagaaagagaga--ga------gagagagaggagagagaaagaaagagagagagagg 292
||||||||||| ||| || |||||||||||||||||||||||||||||||||||
Sbjct: 196 agaaagaaagaaagaaagaaagaaagagagagaggagagagaaagaaagagagagagagg 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
