ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAAAGAATCCGCGGAAT
TCATGGCCTTTCCTTAACGTCTATCCACTCCCTAAAAAACTAACATTGCA
GGCCCGTGAGGTGGCTCAGGTAGAGGCACTGGCCACAAGCCATCTTTGTA
CGTTTACTGTTTTCTTCTTAATACCCTGGCCCCCTACCACTTCACTGCAC
TTTTCTTTATCTGAAAAGATGGAATTCAGAGGAGGCATCCTATTTGGTTC
AAGTGAGCCACTCAATAATGAACATTTATTTAGCAAATGAGAGAATTTGT
TCCAGGCTCGGCAGCTGTGTTCTCTCTTGGGGCTAGGTGCTAACATGTCC
AGTTTGCTTCACTAGATAGTCTTGCTCTTAAAGAAATGACATTTTACTAA
GATTCCGTGGAATATGAGAATAAATCATACTTAAGATAAACTTTTGTTTT
GGGTGGTTAGTACTGGAAATAGCTTGGTATGTGCTTTGTCACCGAGCAAC
AATCCCAGCTCTTGATTATTCTTGAGACAGGGTCTTGTTATGTAGCCATG
CCTGGGATTGCATTCATCACTCTCTTTCCTTGAGTGATAGGATTTCAGGT
GTACGTCACCATGCCCAGCTACACTAGTCACTCTTATCATCACTAGTGGC
AGTGACAGTTATTGAAATAACCTCACATTTGCATGATGTGAGAGGCCGTA
CAGCACAAGGGGTAGGGGACAGATACTTGAATAGGTCTTC

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTTTCAGCAAAATTCAAGAAGGTGGACTCCAGAAAATGAAATAA
CCCCATTAAAAATGATGCCCCGAGCTAAACAAAGAATTATCACCTGAGGA
ATACCGAATGGCTGAGAAGCACCTGAAAAAATGTTCAGCATCCTTAATCA
TCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCTCACCAGCC
AGAATGGCTAAAATCAAAAATTCAGGTGACAGCAGATGCTGGAGAGGATG
TGGAGAAAGAGGAACTCTTCTCCATTGTTGGCGGAATTGCAAGCTTGTAC
ATCCACTCTGTAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTA
CTACAGTAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGT
CCCAACCGGTAAGAAGGACACATGCTCAACTATGTTCATAGCAGACTTAT
TTGTAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAA
TGGATACAGAATATGTGCTACATTTACACAATGGAGTACTACTCAGCTAT
TAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGG
GCATCATCCTGAGTCAGGTAACCCAATCACAAAAAAACTCACATGATATT
ACTCACTGATAAGTGGATATTAACCCAGAAACTTAGAATACCC

Query= MSMg01no300_o13.b1 MSMg01no300_o13.b1 CHROMAT_FILE:
MSMg01no300_o13.b1 PHD_FILE: MSMg01no300_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:10 2005
         (670 letters)



>mm_chr2_18942826_18943895
          Length = 1070

 Score = 1147 bits (593), Expect = 0.0
 Identities = 655/685 (95%), Gaps = 15/685 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctatccactccctaaaaaactaacattgcaggcccgtgaggtggctcaggtagaggcact 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 186 ctatccactccctaaaaaactaacattgcaggcccgtgaggtggcttaggtagaggcact 245

                                                                       
Query: 61  ggccacaagccatctttgtacgtttactgttttcttcttaataccctggccccctaccac 120
           |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 246 ggccacaagccatctttgtatgtttactgttttcttcttagtaccctggccccctaccac 305

                                                                       
Query: 121 ttcactgcacttttcttta---------------tctgaaaagatggaattcagaggagg 165
           |||||||||||| ||||||               ||||||||||||||||||||||||||
Sbjct: 306 ttcactgcacttatctttatctgtgttgtcattctctgaaaagatggaattcagaggagg 365

                                                                       
Query: 166 catcctatttggttcaagtgagccactcaataatgaacatttatttagcaaatgagagaa 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 catcctatttggttcaagtgagccactcaataatgaacatttatttagcaaatgagagaa 425

                                                                       
Query: 226 tttgttccaggctcggcagctgtgttctctcttggggctaggtgctaacatgtccagttt 285
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tttgttccaggcttggcagctgtgttctctcttggggctaggtgctaacatgtccagttt 485

                                                                       
Query: 286 gcttcactagatagtcttgctcttaaagaaatgacattttactaagattccgtggaatat 345
           ||||||||||||||||||||||||||| |||||| |||||||||| |||| |||||||||
Sbjct: 486 gcttcactagatagtcttgctcttaaaaaaatgatattttactaaaattcagtggaatat 545

                                                                       
Query: 346 gagaataaatcatacttaagataaacttttgttttgggtggttagtactggaaatagctt 405
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 546 gagaataaatcatacttaagataaacttttgttttgggtggttagtgctggaaatagctt 605

                                                                       
Query: 406 ggtatgtgctttgtcaccgagcaacaatcccagctcttgattattcttgagacagggtct 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ggtatgtgctttgtcaccgagcaacaatcccagctcttgattattcttgagacagggtct 665

                                                                       
Query: 466 tgttatgtagccatgcctgggattgcattcatcactctctttccttgagtgataggattt 525
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 666 tgttatgtagccatgcctgggattgcattcatcactctctttccttgagtgacaggattt 725

                                                                       
Query: 526 caggtgtacgtcaccatgcccagctacactagtcactcttatcatcactagtggcagtga 585
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 caggtgtacgtcaccatgcccagctacactagtcactcttatcatcactagtggcagtga 785

                                                                       
Query: 586 cagttattgaaataacctcacatttgcatgatgtgagaggccgtacagcacaaggggtag 645
           ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 786 cagttattgaaataatctcacatttgcatgatgtgagaggccatgcagcacaaggggtag 845

                                    
Query: 646 gggacagatacttgaataggtcttc 670
           |||||||| ||||||||||||||||
Sbjct: 846 gggacagaaacttgaataggtcttc 870


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)