ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCAACTGAGGAATATCAAATGGGTAGGAGGCACATTAAATTTTTTTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAAACCTGAGATTC
CACCTCATACCAGTCAGAATGGTTAAGATCAAAAACTCAGGTGACAGCAG
ATACTGGCAAGGATGTGGAGAAAGGGGAACACTGCTCCATTGCTGGTGGG
ACTGTAAGCTGGTATAACAACTCTGGAAATCAGTTTGGTCGTTCCTCAGA
AAATTGGCCATAGTACTACCTGAGTACCCAGCAATACCACTCCTGGGCAT
ATACCCAGAAGATGTTTTTTTCTCGCCACCCCCCCCACATGCTCTACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAAAAGGAAAGAACACAGAT
GTCCCTCAACAGAGGAATGGATACAGAAAATGTGGCACCTTTACACAATG
GAGTACTACTCAGATATTAAAAACAATGAACTAATGAAATTCTTAGGCAA
ATGAATGGATCTGAGGGATATCATCCTAAGTGAGGTAACCCAATCAGAAA
AGATCACACATGATATGCACTCATTGATAAGTGGATATAGCCCAGACGCT
CAGAATACCCAAGATACAATTTGCGAAACATATAATACTCATGAAGATAG
AAATTAGACCTAGTACTACCAGAGGATCCTGAAATACTCCN

ATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCCCCTTATCAGCAACAATGAGGTCAGCAA
AAACAATCAGTGCAGGAAAATGCCATAATGAACACCTCAAGGAGGAATCT
GGCAACAGCTGGAAAGGCTTGGTGTCTCACTCTTGACGCTGTTCTCACTA
AAGGAGTGAATTAAAAGCAACTTGGAAAGTTAGCTTTCAGAAAGCCTCAA
AGTCTGATCTTTCTGAGTGCAAGGATATTGATTAAATTGAAGAAGATTTG
AAAGTCCACCACTTCCTCTCGGCGGCTGTTGCATACTTTGAAAAACAATG
ATTTCATAGTAACAGTCAAAATGCCTTTCATGAATGACTGTTAAAATTAA
TTTCACCTCATTTGATCCATGGGAAGGAAGGTCAAACAAACCTCTGTTAG
ATCTGCACCAACAGCTCAAAGTATGGCTTCTGCTTCTCTGTTCCTGCGCT
GGGAGGCAGGTCAGGGAGAGGAAACTGTGGAGGCAGTCACAGCAGCACTC
AGGTCGAAATGACAGCTGCCCCTGCACAGACATTTTATCTGCAAAGTAGT
ATATTGTTAGTAACTGCCCGCATGTTCCAGGCAGCAGAATGATTGGCCAA
GGCATTTGTTGCTAAAACATGGTCAGTATACCTGTGTTTAACAGTGCAAA
ATCTTTATGATGTAGCTAACAGTTCCAACACTGT

Query= MSMg01no302_b11.g1 MSMg01no302_b11.g1 CHROMAT_FILE:
MSMg01no302_b11.g1 PHD_FILE: MSMg01no302_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:39 2005
         (564 letters)



>mm_chr2_19947738_19948697
          Length = 960

 Score = 1036 bits (536), Expect = 0.0
 Identities = 556/564 (98%), Gaps = 4/564 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccccttatcagcaacaatgaggtcagcaaaaacaatcagtgcaggaaaatgccataatga 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 760 ccccttatcagcaacaatgaggtcagcaaaaacaatcagtgcaggaaaatg-gataatga 702

                                                                       
Query: 61  acacctcaaggaggaatctggcaacagctggaaaggcttggtgtctcactcttgacgctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 acacctcaaggaggaatctggcaacagctggaaaggcttggtgtctcactcttgacgctg 642

                                                                       
Query: 121 ttctcactaaaggagtgaattaaaagcaacttggaaagttagctttcagaaagcctcaaa 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 641 ttctcactaaaggagtgaattaaaaacaacttggaaagttagctttcagaaagcctcaaa 582

                                                                       
Query: 181 gtctgatctttctgagtgcaaggatattgattaaattgaagaagatttgaaagtccacca 240
           |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||
Sbjct: 581 gtctgatctttctgagtgcaaggatattgattaaatt---gaagatttgaaagtccacca 525

                                                                       
Query: 241 cttcctctcggcggctgttgcatactttgaaaaacaatgatttcatagtaacagtcaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cttcctctcggcggctgttgcatactttgaaaaacaatgatttcatagtaacagtcaaaa 465

                                                                       
Query: 301 tgcctttcatgaatgactgttaaaattaatttcacctcatttgatccatgggaaggaagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgcctttcatgaatgactgttaaaattaatttcacctcatttgatccatgggaaggaagg 405

                                                                       
Query: 361 tcaaacaaacctctgttagatctgcaccaacagctcaaagtatggcttctgcttctctgt 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gcaaacaaacctctgttagatctgcaccaacagctcaaagtatggcttctgcttctctgt 345

                                                                       
Query: 421 tcctgcgctgggaggcaggtcagggagaggaaactgtggaggcagtcacagcagcactca 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcctgtgctgggaggcaggtcagggagaggaaactgtggaggcagtcacagcagcactca 285

                                                                       
Query: 481 ggtcgaaatgacagctgcccctgcacagacattttatctgcaaagtagtatattgttagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggtcgaaatgacagctgcccctgcacagacattttatctgcaaagtagtatattgttagt 225

                                   
Query: 541 aactgcccgcatgttccaggcagc 564
           ||||||||||||||||||||||||
Sbjct: 224 aactgcccgcatgttccaggcagc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 960
Length adjustment: 10
Effective length of query: 554
Effective length of database: 950
Effective search space:   526300
Effective search space used:   526300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)