XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CAACTGATGACAACAGAATGGCTGAGAAGCACCTGAAAAAATGTTCAACA
TCCTTAATCATCAGGGAAATGCAAATCAAAACAACTTTGAGATTCCACCT
CACACCAATAAGAATGGCTAAGACCAAAAATTCAGGTGACAGCAGATGGT
GGCGAGGATGTGGAGAAAGAGAAACAGTCCTCCATTGCTGATAGGATTGC
AAGCTTGTACTACTTGTAAACTACTCTGGAAGTCAGTCTGGAGGTTCCTC
AGAAAATTGGAGATAATACTACCAGAAGATCCAGCAATACCTCTCCTGGG
CATATATCCAGAAGAAGTTCCAACTGGTAATAAGAACACATGCTCCACTA
TGTTCATAGCAGCCTTATTTATAATAGCTAGAAGCTGGAAAGAATCCAGA
TGTCCCTCAACAGAAGAATGGATACAGAAAATGTGGTACATTTACACAAT
GGAGTACTACACAGCTATTAAAAACAACGAATTTATGAAATCCTTGGACA
AATGGAGGTATCTGGAGGATATCATCCTGAGTGAGGTAACCGAATCACAA
AAGAAGTCATTAGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAA
CATAGAACACCCAAGATACAATTTTCAAAACACAAGAGAATCAAGAAGAG
GGAAGACCACCAGGTGGATACTTCATTCCTCCTTAGAATAGGGA

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATTTGTGAAATAAATATATAGATATAGCACCA
CGCCATGAATTCATTTGTGAAATAAATATATAGATATAGCACCACGCTGC
CTATCTGAGGAAGCCAACAGGTTGTAGATTGTGGCATCGACTCCAGTTAG
ACAATGCACAAAACATTGAATAAAATCGTTTGGTTGACATAAAAATGAAG
TGAAGAAACATTCGTTCAACACTGCTTTTGCTGCTCTGACAGGACATGGC
GTCTGCTCTCAAGCAGCACAGAACCAATCAAAGTGAAGTACAGAGATTTA
TCTTAACAGGGCCTGACTAGGACTATAGAATGCATGTCAGGGGTGGGATC
TCTGTGCACTCACGGCCAGCCTGGGCTACCCAGGGAGCTCCTGGACGACC
AGGTCTACATATTCAGTCTGAAAACAGAAACATAATAAACCATCAGATTC
ATTTAAAACCCAGAAAGTCAGGAACATATCTGTAAAACATACACATCTAA
GAGAAAGTAAGAACTTTACAAAGTAAGCCTACAGCCATCACCCATAGTTT
TAAATAATCCAAAGATAATGAAATTAGACAGAGAGCTGTTTTGATTTCTT
GAATGGCAGTGAATGAAGCCTTTTTGGAAGCTGTTCTTAAGGGCACTGAG
GTGATAATACACAGCCACTTCTAACTTTGAAGAANATGGGG

Query= MSMg01no303_d19.g1 MSMg01no303_d19.g1 CHROMAT_FILE:
MSMg01no303_d19.g1 PHD_FILE: MSMg01no303_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:06 2005
         (665 letters)



>mm_chr2_101527157_101528222
          Length = 1066

 Score =  982 bits (508), Expect = 0.0
 Identities = 523/528 (99%), Gaps = 1/528 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atttgtgaaataaatat-atagatatagcaccacgccatgaattcatttgtgaaataaat 59
           ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atttgtgaaataaatataatatatatagcaccacgccatgaattcatttgtgaaataaat 469

                                                                       
Query: 60  atatagatatagcaccacgctgcctatctgaggaagccaacaggttgtagattgtggcat 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 atatagatatagcaccacgctgcctatctgaggaagccaacaggttgtagattgtggcat 409

                                                                       
Query: 120 cgactccagttagacaatgcacaaaacattgaataaaatcgtttggttgacataaaaatg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 cgactccagttagacaatgcacaaaacattgaataaaatcgtttggttgacataaaaatg 349

                                                                       
Query: 180 aagtgaagaaacattcgttcaacactgcttttgctgctctgacaggacatggcgtctgct 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aagtgaagaaacattcgttcaacactgcttttgctgctctgacaggacatggcgtctgct 289

                                                                       
Query: 240 ctcaagcagcacagaaccaatcaaagtgaagtacagagatttatcttaacagggcctgac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctcaagcagcacagaaccaatcaaagtgaagtacagagatttatcttaacagggcctgac 229

                                                                       
Query: 300 taggactatagaatgcatgtcaggggtgggatctctgtgcactcacggccagcctgggct 359
           ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 228 taggactatagaatgcatgccaggggtgggatctctgtgcactcagggccagcctgggct 169

                                                                       
Query: 360 acccagggagctcctggacgaccaggtctacatattcagtctgaaaacagaaacataata 419
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 acccagggagctcctggaagaccaggtctacatattcagtctgaaaacagaaacataata 109

                                                                       
Query: 420 aaccatcagattcatttaaaacccagaaagtcaggaacatatctgtaaaacatacacatc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aaccatcagattcatttaaaacccagaaagtcaggaacatatctgtaaaacatacacatc 49

                                                           
Query: 480 taagagaaagtaagaactttacaaagtaagcctacagccatcacccat 527
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  taagagaaagtaagaactttacaaagtaagcctacagccatcacccat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1066
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1056
Effective search space:   691680
Effective search space used:   691680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)