Query= MSMg01no303_e01.b1 MSMg01no303_e01.b1 CHROMAT_FILE:
MSMg01no303_e01.b1 PHD_FILE: MSMg01no303_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:07 2005
(250 letters)
>mm_chr2_20924694_20925343
Length = 650
Score = 447 bits (231), Expect = e-130
Identities = 245/250 (98%)
Strand = Plus / Plus
Query: 1 aaaaggttggaatggntgaccaccaagaacttttccatggtgtgcaactgggcccccatg 60
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 aaaaggttggaatggctgaccaccaagaacttttccatggtgtgcaactgggaagccatg 260
Query: 61 taattcatctagtctgtggtcactgtggcctccctcagacctaaatagcttaaatatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taattcatctagtctgtggtcactgtggcctccctcagacctaaatagcttaaatatgca 320
Query: 121 cagcactgccctgggttcaaatacagagtacatgcactattaggagagaaggctaaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcactgccctgggttcaaatacagagtacatgcactattaggagagaaggctaaatgt 380
Query: 181 atagagctgttgctaagaaaattggcttaccaaacctacactgggtacttcccaggtcca 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagagctgttgctaagaaaatcggcttaccaaacctacactgggtacttcccaggtcca 440
Query: 241 gcactagctg 250
||||||||||
Sbjct: 441 gcactagctg 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no303_e01.g1 MSMg01no303_e01.g1 CHROMAT_FILE:
MSMg01no303_e01.g1 PHD_FILE: MSMg01no303_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:07 2005
(656 letters)
>mm_chr2_21091849_21092904
Length = 1056
Score = 1253 bits (648), Expect = 0.0
Identities = 654/656 (99%), Gaps = 1/656 (0%)
Strand = Plus / Minus
Query: 1 tcccatccaagcactaacaggccctaactctgcatagcttccaagatcacgaagcgatca 60
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 943 tcccatccaagcactaaaaggccctaactctgcatagcttccaagatca-gaagcgatca 885
Query: 61 gctgtgttcagggagatatggccacagagtctttaaattctaacaatgatatatgatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gctgtgttcagggagatatggccacagagtctttaaattctaacaatgatatatgatttg 825
Query: 121 cccctttcagttagtaatattgggggactcatctcctgtcaagatatgttatcaacattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 cccctttcagttagtaatattgggggactcatctcctgtcaagatatgttatcaacattc 765
Query: 181 cttttgtggatgcatgctttgagttccataggcctatatgattaactttatctgtgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 cttttgtggatgcatgctttgagttccataggcctatatgattaactttatctgtgtctt 705
Query: 241 attggtagaatctttaattacttcagtctttattattaaaatcagtgcaccgtgaaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 attggtagaatctttaattacttcagtctttattattaaaatcagtgcaccgtgaaccaa 645
Query: 301 cttgtaaggacaccatttcacacttttgggtgcatttgtaggataatatccccaggaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cttgtaaggacaccatttcacacttttgggtgcatttgtaggataatatccccaggaaag 585
Query: 361 aaatatttgaatcaaaaagcatatgcacttagaatcttgtaaggtaatatactttttcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aaatatttgaatcaaaaagcatatgcacttagaatcttgtaaggtaatatactttttcta 525
Query: 421 tgtgtatgtcattacgggatgtagatgtacatgatctaaaatttccaacctacatacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tgtgtatgtcattacgggatgtagatgtacatgatctaaaatttccaacctacatacaga 465
Query: 481 aaagtaggaagagtcattcttcatccttctcttacagccacaaccccctttcccagaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aaagtaggaagagtcattcttcatccttctcttacagccacaaccccctttcccagaggc 405
Query: 541 agccactgggaccaacttccaaataagactttgtgcatatggatatttttaatacaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 agccactgggaccaacttccaaataagactttgtgcatatggatatttttaatacaaaaa 345
Query: 601 atgtgtatgtttctatagaactactcagaagtacttctatattaaaggtatgtggt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atgtgtatgtttctatagaactactcagaagtacttctatattaaaggtatgtggt 289
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
